KEGG   Brassica napus (rape): 106453104
Entry
106453104         CDS       T04128                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5-like
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106453104
Spliceosome [BR:bna03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106453104
 Complex B
    106453104
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 RRM_1 zf-CCCH_4
Other DBs
NCBI-GeneID: 106453104
NCBI-ProteinID: XP_013750795
LinkDB
Position
C8:complement(25903140..25907014)
AA seq 740 aa
MEPRNEKEEGERLEEAMGGFEESKEKSAEMSRKEKRKAMKKMKRKQVRKEIASKEREEAE
AKLNDPAEQEKLKAIEEEEERKREKELREFEDSERAWREAMEIQRKKEEVEEKRWKELEE
LRKLEASGDDECGEDDDGEYEYIEEGPPEIIFQGNEIILRKNKVKVPKRSVAQVEGNEIA
DRPTSNPLPPGTEAFPKNHNVSSAQQILDSVAQEVPNFGTEQDKAHCPFHLKTGACRFGP
RCSRVHFYPDKSCTILMKNMYNGPGIAWEQDEGLEYTDEEAEQCYEEFYEDVHTEFLKYG
ELINFKVCRNGSFHLKGNVYVHYRSLESAMLAYQSINGRYFAGKQVNCEFVNISRWKVAI
CGEFMKSRLKTCSRGSACNFIHCFRNPGGDYEWADFDKPPPRFWIRKMAALFGYSDEDLK
HMEREYSGSLSEFRSDQPSDSQRQASRRSRSRDHDHVNVGSKPSYRSRKNHGDTRDSSRG
HKLSRHEENCHGSPSSNRDGSLEREIYKEPRHAKETSRHESKWSEHSPTHRGMRKRIHER
YSDDDSGDDDGRGETDHKRKSSRRYGRRGSNSEVQERLDDEEDTRCHWSSSDRRSRKEDH
REGSLGDQEESHAVGEKSKRERSSSRHSHEGDSSGSRHRRHKRSDLRDKDGNERKRSVET
SPRDKDRDKSKQRRRYKTGDPDYDRSRNGKRENVSGSSSDEKREERHKEGSGSSHRKRRR
SSHEQTPKEPEEIIERWRPI
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggagccgcggaacgaaaaggaagaaggagagcgactcgaagaagcgatgggagggttt
gaagagagtaaagagaaatcggcggagatgagccgtaaggagaaacgaaaagcgatgaag
aagatgaagaggaagcaggtgaggaaggagatagcgtcgaaagagagagaggaggcggaa
gccaagttaaacgatccggcggagcaggagaagctgaaggcgattgaggaagaggaggag
cggaagagagagaaggagctgagagagttcgaggatagtgagagagcttggagagaggct
atggagattcagaggaagaaagaggaagtagaagagaagcgttggaaggagttagaggag
ttgagaaagcttgaggctagtggggatgatgaatgtggtgaggatgatgatggtgaatat
gaatatattgaagaagggcctccagagattatattccagggtaatgagatcattctgagg
aagaacaaagtgaaggttccaaagagatctgtagctcaggtggaaggaaatgagattgct
gacaggcctacatcgaaccctctacctccgggaacagaagcttttccaaagaatcataat
gttagctctgctcagcagattctggatagtgttgcacaggaagtacccaacttcggaact
gagcaggataaagctcattgtcctttccatttaaagactggagcttgtcggtttggcccg
cgttgcagcagggttcatttctacccggataaatcgtgcactatacttatgaagaacatg
tataacggtcctggcattgcttgggagcaggatgaggggcttgagtatacagatgaggaa
gctgaacaatgttacgaagaattttatgaagatgttcatacggagtttctgaagtatgga
gaacttattaatttcaaggtatgtagaaatggctcattccacttgaagggaaatgtgtat
gtacactacagatcattggaatctgctatgcttgcctaccaatccatcaatggtcgatat
tttgctggtaaacaggtgaactgcgaatttgtaaacatctcaagatggaaagtcgccata
tgcggggagttcatgaagtcgaggcttaaaacttgctctcgtggatctgcttgcaacttc
atccattgtttccgaaaccctggtggagactatgaatgggctgactttgacaaaccacct
ccaagattctggattcgcaaaatggccgctttatttggttattcagatgaagacttgaag
cacatggagcgtgaatattcagggtcgttgagtgagtttagatcagaccaaccatcagat
tcacagaggcaagcttcaagaagatctagatcgagggaccatgatcatgtgaacgttgga
tctaaaccttcttataggagccgtaagaatcatggtgatactcgggacagctctcgtgga
cacaaacttagtaggcatgaagagaactgtcatggaagtcctagcagtaatagagacggt
agtttagagagggagatttataaagagccacggcatgctaaagagacatcgcgtcatgaa
agcaaatggtctgaacactctcctacacatcgggggatgaggaaaagaatccacgagagg
tattccgatgatgattcaggagatgacgacggcaggggagagacggatcacaaacggaaa
agctcaaggcgttatggcagaagaggctcaaattcagaagttcaagaacggctggacgat
gaagaggacacgaggtgccattggtctagttctgacaggaggtcaaggaaagaagatcac
agggaaggatcattaggtgatcaggaggagagtcatgcagttggtgaaaagtcgaagagg
gaaagaagcagctcaagacattcgcacgagggagactcgagtggaagtagacatcgtcgg
cataaaagatcagaccttagagacaaggacggaaatgagaggaaaagaagtgtggagacc
agtccacgagataaagatagggacaagagcaagcagagacgtagatacaagaccggtgat
cctgattatgatcgaagcaggaatggaaagagagagaatgtaagtggttcatcaagtgat
gagaagagagaagaaagacacaaagagggatctggtagtagccataggaaacgaagaagg
tcatcacacgagcagactccaaaggaaccagaggagattattgagcgttggagaccaata
tga

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