Brassica napus (rape): 106453222
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Entry
106453222 CDS
T04128
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106453222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106453222
03400 DNA repair and recombination proteins [BR:
bna03400
]
106453222
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106453222
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106453222
BRCA1-C complex
106453222
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
106453222
NCBI-ProteinID:
XP_013750936
UniProt:
A0A078INP1
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Position
A5:27978665..27981608
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AA seq
536 aa
AA seq
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MVWGLFPVDPLSGEDKYYIFSKGTYKIGRKGCDIIINKDKGVSRIHAELTFDATVASTSR
RNKSPDTSFVIRVKDCSKYGTFIKTDPGTKDKVHELPNKERILSDGDVITFGTGAATYRL
SLIPLVFYYCPSSETFKVDRSVQDAVSSIGARIAPTLSDECTHVLVEPRMQVNEALLNAV
LAQKPIILTNWVKLLGEKSIRSEFPGNSQYRPSVMVEEALVDVMEQNIREKCLEGFTFVL
ESTDMYRFGSSFPSLLKVCGAETVAVAEISSMSQESQYGETNRMICVIPVSSGDKFARLK
HLSLLSRVNEMDLISAVLSGNLPSTSLIPPSVVISSSCSTDETVVADSDVEEEETTSSVH
MIDATEKAETPEEPPAAIVIEESPVTAVEETMNLNEFKSVNLSADTEMKDYNDVTTIKRD
RNDEPECGNSEVIYTQHLIVRDLRSIRDVRSTGVEGVVDFKRFRKGNVIISGNSFSSLIP
FAKDPYKEYDTSEVTDFMKEEKKRKQREAVAEDLFNNEKARKRGTAGSISGFLTRS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtctctttcccgttgatcctctctcaggtgaagataaatactatatcttt
tcaaaagggacttacaagattggtcgcaaaggatgtgacatcattatcaataaggataag
ggagtgtctaggatccacgcagagttaactttcgacgcaacagttgcctcaacctctcgc
aggaataaatctcccgacacctcatttgttatccgtgtcaaagattgttcaaagtatggc
acttttatcaaaactgaccccgggacaaaagacaaagtccatgagctacctaacaaggag
aggattctcagtgatggagatgttatcacctttggtactggtgcagctacttacaggttg
tctttgatcccgctggtgttttactactgcccttcctctgagacctttaaggtggatcgg
tccgtacaagatgcagtttcatcaatcggtgctcgtattgctcctacattgagtgatgag
tgcacacatgttcttgttgagccgcgtatgcaagtgaatgaagctctactcaatgcagtt
ttagcccaaaaacccatcattttgacgaattgggttaagcttcttggagagaaaagtatc
cgcagcgagtttcctggaaacagtcagtacagaccatcagtgatggtggaagaagctttg
gtggatgtaatggaacaaaacatccgtgaaaaatgtctagaaggattcacctttgtgttg
gaatcaacagacatgtacaggtttggtagcagcttcccgtctttactcaaagtatgcggc
gcagagactgttgccgtagcagagatcagctccatgagtcaggagtctcagtatggagaa
actaatcggatgatatgtgtcatcccagtaagctcaggagacaagtttgcccgtttgaag
catctcagtctgttatctagagtgaacgagatggacttaataagtgctgtcttgtctgga
aatctaccttcgacttcgttgataccaccttctgttgtgatttcatcatcgtgctccacg
gatgagacagtggtagcagactctgatgtcgaagaggaagaaacaacatcgtcagttcat
atgatcgacgccaccgagaaggcggaaacaccagaggagcctcctgctgcgatagtgata
gaagagagtccggttacagcagtggaagaaactatgaatttgaacgagttcaaaagcgtg
aacttatcggcagataccgaaatgaaagactacaatgatgtgacgacaatcaaaagggat
cgtaacgatgagcctgaatgtggcaactcggaggttatctacactcaacatctcattgtt
agggatttgcggtcaataagagatgtccggtctacaggagtggaaggagttgttgacttc
aagcgatttagaaaggggaatgttataatatcaggaaacagcttcagtagtctaatacct
ttcgccaaggatccatacaaagagtacgataccagtgaagtgacggactttatgaaagaa
gagaagaagaggaagcagagagaagccgttgcagaggacttgttcaacaatgaaaaggct
agaaagcgtggaacggctggttccatcagcgggtttctcactcgaagttga
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