Brassica napus (rape): 106453255
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Entry
106453255 CDS
T04128
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106453255
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106453255
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
FlgA_N
Motif
Other DBs
NCBI-GeneID:
106453255
NCBI-ProteinID:
XP_013750978
UniProt:
A0A816TTT6
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Position
A5:28908811..28911653
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AA seq
398 aa
AA seq
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MSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAE
LNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVESHD
VSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARNALDGRSIPKYLLPDH
VASCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSN
VLLALIENMQYAVTVDVLHTVFSAYGSVQKIAIFEKNGSTQALIQYSDIATAAIAKEALE
GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVGQNVPGVADASAPTAGW
QNGQVQTQYAGYGGSPYMYPSADHAGASPSSGHPPYYG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcacagtttcggtatacgcagacgccgtcgaaggtggtgcacctgcggaat
ctgccgtgggaatgcgtggaagaagagctcatcgacctgtgcaaacgattcggcaaaatc
gtaaataccaaaaccaatgtcggcgccaatcgcaaccaagccttcgtcgaattcgctgag
ttgaatcaggctatatcaatggtttcgtattatgcttcgtcttcagagcctgcgcagatt
cgtgggaaaactgtttatatacagtactctaatcgccatgagattgtcaacaaccagagt
cctggagatgtccctgggaatgtcctcttggttacctttgaaggagtcgaatctcacgat
gtcagcatcgatgtcatccatctggtgttttctgcttttggattcgttcacaaaattgcc
acttttgagaaagctgctggtttccaggcactagttcaattcactgatgtggagactgct
tcagcggcaaggaatgcgctagatggaagaagtatacccaaatatctacttccagaccac
gttgcctcttgcaatttgcgaatgtcttattcagctcatactgatctaaacatcaagttt
cagtcccatcgtagcagggattacacaaatccataccttccagtgaatcataccgcaatg
gacgggtctatgcagcctgctttgggtgctgatggaaagaaggtagaaactcagagcaat
gtcctgcttgctttgattgagaatatgcagtatgctgtcaccgtggatgttcttcacacg
gtcttttcagcgtatgggtctgtccagaagattgctatatttgagaagaatggttcaaca
caagccttaattcaatactctgatatagcaacggcggcaatagctaaagaagcattggaa
ggacactgcatatatgacggtggctactgtaagcttcgactatcatactctcgtcatact
gatctcaatgtaaaggcttttagcgacaaaagcagagactacacactacctgatctgagc
ctactcgtgggccaaaatgttcccggagtggctgacgcttctgcgccaacagctggttgg
cagaatgggcaggtgcaaactcaatacgcaggttatggtggaagtccatatatgtaccct
tcagctgatcacgcaggggcttcaccttcttctggtcatcctccttactatggttga
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