Brassica napus (rape): 106453413 Help Entry 106453413         CDS       T04128                                  Name (RefSeq) RNA helicase aquarius-like   KO K12874   intron-binding protein aquarius Organism bna  Brassica napus (rape) Pathway bna03040   Spliceosome Brite KEGG Orthology (KO) [BR:bna00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     106453413  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:bna03041]     106453413 Spliceosome [BR:bna03041]  Complex B   Other components    Prp19-related factors     106453413  Complex C     106453413 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 AAA_30 UvrD-helicase UvrD_C_2 ResIII AAA_22 SLFN-g3_helicase AAA AAA_16 Motif Other DBs NCBI-GeneID:  106453413 NCBI-ProteinID:  XP_048636472 LinkDB All DBs Position A5:3848186..3854943 Genome browser AA seq 1500 aa AA seqDB search MTKVYGTGTYDFKRHRVAEYPLADKPLESKPGSNLPSSITLSEIQHDRLTKIAEESWIKT GGEMPEKPFDPEVVKEIYATELKVVSGRKPVPLQRVMVLEVSQYLENYLWPNFDPETATF EHVMSMILMINEKFRENVAAWICFHDNEDLFKKFLQKVLRLKEGRDLTIAEKTNYLVFMI NAFQSLEDAVVNETVLSLAGLQSWHSLSYGRFQMELCLQPDLIKKWKRLSKKWAAEAMSK GEQFDPSSSPEANFVRSLIEEFVEVLDHGVFSDEGDDTAGFQLVDDSSVLYCERFMEFLI DMLNQLPTRRYLRPLVADIAVVAKCRLSVLYKHEKGKLFAQLVDLLQFYEKFEIKDHDGT QLTDDEALQFHYDRFMAFQLLAFKKIPKLRDVALANIGSVHKSSDLRRRLSALSLEDLRD VVCSKLKLVSRNDPWADSKDFLTEVVVSSFEKQQSQKEAINALPLYPNEQIMWDESVIPS INYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLLAHIDNEGD TAFRGWSRMAVPINGFKIAQVKQPNIGEEKPSSVTAEVTFSIKSYRTQIRSEWNSLKEHD VLFLLCIRPSFEPLGAEEADKATVPQRLGLQYVRGCEVIEIRDEEGNLMNDFSGKVKRDE WKPPKGEMRTVTVALDAAQYHIDVTDIAEKGAEDVYGTFNVLMRRKPKENNFKAILESIR DLMNEYCIVPEWLHNVFLGYGNPSAAQWPNMPNLLKTVDFKDTFLDANHLSESFPDYEVS FVNSDGGEVLDPRPPFRITLPKTLKGNANALSGNKISEINPADNADMVDVSPKEKLIVEA YTPPDPGPYPQDQPKQNSVKFTPTQVGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLY HNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELATDLDFSRQGRVNAM LVRRLELLSEVERLARSLQIPEDVGYTCETAGYFWLLHVYSRWELFLAACAGNENNPSFV QDRFPFKEFFSDTPKPVFSGESFEKDMRAATGCFSHLKTVFQELEECRAFELLKSTADRA NYLMTKQAKIVAMTCTHAALKRRDFLKLGFKYDNLLMEESAQILEIETFIPMLLQRQEDG HARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQGRARPSLA KLYNWRYRDLGDLSIVKEAPVFHKANAGFSYDYQLINVPDYEGRGESTPSPWFYQNQGEA EYIVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPYAFIGPPSKVTTVDKFQ GQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQCYELQPTFQLLL KRPDRLGLNLSENTSAYTDRAVEEVGNSYLVHDVEEMAHIVHDRMNEFYKAQGVYEQYQN NMPQIEDGNQDMESDSVVVGEDGESEKTVQPELDGLVDETSTEMDVDNGVSSENGKADEN NT seq 4503 nt NT seq  +upstreamnt  +downstreamnt atgacgaaggtctacggaaccggcacctacgacttcaagcgccacagagtcgccgagtat ccactcgctgacaagccgctcgagtcgaagcctggatccaatctcccgagctccatcact ctatcggagatccagcacgacaggctgacgaagatcgccgaggagagctggatcaagacc ggcggcgagatgcctgagaaaccgttcgatccggaggttgtgaaggagatttacgcgacg gagctgaaggtggttagtggccgtaaaccggttccgctgcagcgggtgatggttctggaa gtgagtcagtacttggagaactatctgtggcctaatttcgatcccgagacggcgacgttt gagcatgttatgtcgatgattcttatgattaacgagaagtttcgggagaatgtggcggct tggatttgctttcatgataatgaagatctgttcaagaagtttcttcagaaggttcttcgc cttaaagagggaagagacttgactattgctgagaagacaaattatttggtcttcatgatc aatgctttccagagtttggaagacgcggtggttaatgagactgttctaagtctagcagga ttacaatcttggcacagtttgtcttatggacgtttccagatggagctttgccttcaacct gatctaataaaaaagtggaagaggttgtcaaagaagtgggcagctgaggcaatgtcaaag ggagagcagtttgatccatcctcatcacctgaagcaaattttgtgcgaagcctaatagaa gaatttgtcgaggttcttgatcacggagttttttcggatgagggtgatgatactgctgga tttcaattggtggatgattcttctgtcttatattgcgagagattcatggaatttctcatt gatatgctgaaccaacttccaacaagaagatacttaagacctcttgtggcggatatagca gttgttgccaaatgtcgactgagtgtcctatacaaacatgaaaaggggaagcttttcgcc cagttagttgacttgttacagttctacgaaaagtttgagattaaggatcatgatggaaca caattaactgatgatgaagcacttcaatttcattacgatcgttttatggcgtttcagcta cttgcctttaagaaaatacccaagttgcgagatgtggctttggctaatattggttcggtt cacaagagttctgatcttcggaggagattgtctgcgctttctcttgaagatttaagggat gttgtctgctcaaagcttaaactggtttcaagaaatgatccttgggcagatagtaaggat tttctgactgaggtcgttgtctcttcctttgagaagcaacagtctcagaaagaagccata aacgctctgcccttgtacccaaatgagcaaatcatgtgggacgaaagtgttattccaagc attaactattctggggaaggttgccttgctctcccaaagcttaatcttcagtttctaaca ctccacgattacctccttagaaacttcaatctcttccgtctagaatctacctatgagatt cgtgaagacatacaggaagctgtaccacatcttcttgcacacatagataacgagggagac accgcttttcgtggttggtcacgaatggccgttccgattaatggattcaaaatcgctcag gtgaagcagccaaatattggagaagagaagccatcatctgtgactgcagaagttaccttc agtattaagagttacagaacacagataagatctgaatggaattcccttaaagagcatgat gtactgtttttgctttgtatacgcccttcatttgagccattaggtgcagaggaagctgat aaagctacagtgccacagaggcttgggcttcagtatgttcgtggttgtgaagtcattgag atccgtgacgaggaaggaaatctgatgaatgattttagtggaaaagttaaacgggatgaa tggaagccccctaaaggtgaaatgaggactgtgaccgtcgctttagatgctgcgcagtat cacatagatgttacagacattgctgaaaaaggtgccgaggatgtgtatggcacatttaat gtgctaatgaggagaaaaccaaaagagaacaacttcaaggctattctggaatctatcaga gatctcatgaatgaatattgtattgttccggagtggttgcataacgtatttcttgggtat ggaaacccttctgctgcacagtggcctaatatgccaaaccttttgaaaacagtggacttc aaagatactttccttgatgcaaatcatctcagtgaaagttttccagattatgaggtatct ttcgtcaattctgatggcggtgaagttctggatccaaggcctccctttagaatcactctt ccaaagacactaaaagggaatgctaatgctctttctggaaataagatatctgaaataaat ccagcagataatgctgatatggtggatgtatccccaaaggagaaacttatcgttgaggca tataccccacctgacccagggccttatcctcaggaccagccgaagcagaactcagttaaa tttacacctacgcaggttggagcgattatctctggtattcagcctgggctcactatggtt gttggtccaccgggtaccggaaagactgatacagcagtgcaaatcttaaatgtgctatat cacaactgtccttctcaaaggaccttgattatcactcattctaatcaggctctgaatgat ctttttgagaagataatggagagggatgtgccagcgcggtatctacttcgtttgggtcaa ggtgaacaagagcttgccactgatctcgactttagcagacaaggccgtgtcaatgccatg cttgttcgacgtttagaactgctcagcgaggttgagagactagcaagatctcttcaaatt ccagaggatgtaggttatacttgtgaaaccgctgggtatttctggttgcttcatgtctac tcgcgttgggagctatttctggctgcttgtgctggaaatgaaaacaatccatcttttgtt caagatcgcttcccgttcaaagagttcttctcagacacgcctaagcctgtttttagtggg gagtcatttgagaaagacatgagggcagctacaggttgtttctctcatctcaagaccgtg ttccaagagctagaagagtgtagggcctttgaactgctcaaatcaactgcggatagagca aattacctgatgaccaaacaagcaaagattgtagcaatgacgtgtactcatgcagcatta aagaggagagattttcttaagttggggttcaagtatgacaacttactgatggaagaaagt gctcagattctggaaattgagactttcataccaatgttgcttcagaggcaagaagatggc catgcacgactcaagcgctgtatactgattggtgatcaccaccagcttcctcccgtggtg aaaaatatggctttccagaaatacagtcacatggatcagagtctgttcacgaggtttgtg cgtcttggtattccgtatatcgagcttaatgctcaaggaagagccaggccaagcttagcc aaactgtacaactggagatacagagacttgggagatctttccattgttaaggaagcaccc gtctttcataaagcaaacgctggattctcatacgactatcagttgattaatgtgcctgat tacgaagggagaggagagtcaacaccatctccatggttttatcaaaatcagggagaagct gagtatatcgtcagtgtctatatatacatgagattgctgggatatcctgctaacaagata tcaatattgacgacatataatggtcagaagctcttaatccgtgatgttatcaaccgtcga tgtgttccctatgctttcatcggcccacctagcaaggtgaccacagtggacaagttccaa ggacagcagaatgactttattttgctgtcacttgtacgaacacgctttgttgggcatcta cgtgatgtgagaaggttggtagttgcaatgtcgcgtgctaggctcggactgtatgtgttc tgccgccgctctctctttgaacagtgctatgaactgcaacctacgtttcaacttcttctg aaaagacccgataggctcggcctcaacctgagcgagaacacatcagcttatacggatcgt gcggtggaggaagttggaaattcttatcttgttcatgatgttgaagagatggcacacata gttcacgacaggatgaacgagttctacaaggcacaaggcgtgtacgagcaataccagaat aacatgccacaaatcgaagatggtaatcaggatatggagagtgattcagttgtagtaggt gaagatggtgaatctgagaagacggtgcagccagagttagatggcttagttgatgaaaca tcgacggagatggacgtggacaatggagttagcagtgagaatggaaaggctgatgagaac tag

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