Brassica napus (rape): 106453924
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Entry
106453924 CDS
T04128
Name
(RefSeq) protein CHROMATIN REMODELING 25-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106453924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
106453924
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106453924
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
106453924
NCBI-ProteinID:
XP_048637008
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All DBs
Position
A5:21537416..21544348
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AA seq
913 aa
AA seq
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MEEEEEVVISSSDSEDSSDSYEEESQDSEGEYENSDENPDCEDLAAVSPPSDADRKSKNV
NDLLRGNLVVQRQPLLPRVLSVSEGAAVCRKPFKPPCSHGYNTTGQLSRRLSARKRFVPW
GSSSPVVVVLPTKLNESTTIERDEEEEAVSLPPEVEPLVLWQLEESDDATKITVHPLLVR
FLRPHQREGVQFMFDCVSGLHGSENINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPM
VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLII
SYETFRMHSSKFGQTGSCDLLICDEAHRLKNDQTLTNKALASLTCKRRVLLSGTPMQNDL
EEFFAMVNFTNPGSLGDASHFRHYFEAPIICGREPTATEEEKNLAAERSAELSSKVNQFI
LRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYITA
LKKLCNHPKLIYDTIKSKSPGTIGFEDCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHV
LSRLLANLRRNTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGSTSISKRQKLVNRLN
DPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYR
FLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVTSEIH
GKMSCSRCQNDASGTENTEEGNENNLDDSACQTDQEDIGGFANDAGCLHSLKISERQVGT
PLEEDLASWGHHSTSKSVPDMILQASAGDEVTFVFTNQVDGKLIPIKSNPSPKPEVTETG
RNRNQAVSNRGFNKPQQRPREPLQPLSPNETNKRVKLSTYKRLHCTSNTDGAQMQMPLQR
PNQVSVNHDDDFV
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagaagaagtcgtcatctcgtcttccgattccgaagattccagcgacagt
tacgaggaagaatctcaagattcggaaggagagtacgaaaattccgacgaaaaccctgac
tgcgaagaccttgccgccgtttctcctccgtccgacgccgatcggaaatctaagaacgta
aacgatctattgaggggcaatctggtggtgcaacggcagccactccttcctcgggtgctt
tcagtatctgaaggagcggcagtgtgtaggaagcctttcaagcctccttgttctcatggt
tataataccaccggtcaactttctcgtcgcctttcggctcggaaacgctttgttccttgg
ggttcttcaagtccagttgtggttgttctgcctactaagctcaatgaatcaaccactatt
gagagagatgaagaagaggaagctgtttctcttccacctgaagttgaaccgttggtactg
tggcaacttgaagaatctgatgacgcaacgaaaattactgtgcatccattgcttgttcga
tttcttcggcctcatcaaagagaaggtgtgcagttcatgttcgattgtgtttcaggatta
catggttcggaaaatataaatggttgcattctggctgacgacatgggtttggggaagaca
ttgcagtccattactttactatacacacttctatgtcaaggatttgatgggactcctatg
gttaaaaaggccattattgttacaccaacgagtcttgtcagtaactgggaagctgaaatt
aagaaatgggttggagacaggattcagcttatagccctctgtgaaagcacccgagatgat
gttttgtctggaatagatagtttcactcgaccacgaagcgctttgcaggtacttattatt
tcttacgagacattccgaatgcactcatccaagttcggccagactggatcctgtgatctt
ctaatatgcgatgaggctcataggttgaaaaatgaccagacactaactaacaaggctttg
gcttcattgacatgcaaaaggcgggttttgttgtctggaactcccatgcagaatgacttg
gaagagttttttgccatggtcaactttacaaatccaggaagtttaggcgatgcttcgcat
tttcgccactattttgaggcacctattatttgtggaagagaacctacagctactgaggaa
gagaaaaatttagctgctgaacgctcggcagaactgagttcaaaagtgaatcagtttata
ttgaggagaactaatgcattgctctccaatcatttaccacctaagataattgaagtagtt
tgttgcaagatgactactctccagtccactttgtacaatcattttataagctcaaaaaat
cttaaaagagcacttgctgataatgcaaagcagacaaaagttttggcttatataacagct
ctcaagaagctctgcaatcatccaaagctaatttacgatacaataaaaagcaaaagtcct
ggtactattggttttgaggattgcttagagtttttccctgcagaaatgttctccgggaga
tctggagcatggaccgggggtgatggtgcctgggtcgaactctctgggaaaatgcatgtt
ctctccagacttttggctaacctacgtcggaatacagatgaccgcatagtccttgtatca
aactatacgcagacattggatcttttcgctcaactctgtcgcgaaagaagatatccttat
ctgaggctggatggatcaacatctatcagcaagaggcagaagcttgttaaccggttgaac
gacccaacaaaggatgaatttgcatttctcttaagcagcaaggcaggtggctgtggatta
aatttaattggtgctaatcgacttgttttgttcgatcccgattggaatcctgccaatgat
aaacaagctgctgctagagtttggagggatgggcaaaagaaaagagtgtatgtctacaga
tttcttagtactggaactattgaagaaaaggtataccagcgtcagatgtcaaaagaaggg
cttcaaaaagttattcagcatgaacagacggataacagcactagacagggaaacttactt
tcaacagaggatttaagagacttattttccttccacggtgatgttacgtctgaaatccat
ggaaagatgagctgcagcaggtgccaaaatgatgcctctggtacagaaaatacggaagaa
ggaaatgagaacaatcttgatgacagtgcttgccagactgatcaagaagatataggcgga
tttgcaaacgatgcaggatgccttcactcgttgaaaatctccgagagacaggtgggcact
ccattggaggaagatctagcaagctggggtcatcattctacctcaaagtctgttccagat
atgatactgcaagcttcagctggtgacgaggttacatttgtattcacaaaccaggtagat
gggaagctcattcccatcaaatcaaatcctagtccaaaaccggaagtaaccgaaacaggt
cgcaaccgaaaccaagctgtaagtaaccgtggcttcaacaagccgcaacaaagacctcgg
gaaccgctgcaaccgttgtctcccaacgagaccaacaaaagagtgaagttgtctacgtat
aagcgtttacactgtactagtaatactgatggtgctcaaatgcaaatgcctttgcaaaga
ccaaatcaagtgtctgtaaatcatgatgatgattttgtgtga
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