Brassica napus (rape): 106454172
Help
Entry
106454172 CDS
T04128
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
bna
Brassica napus (rape)
Pathway
bna00730
Thiamine metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
106454172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106454172
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
106454172
Ribosome biogenesis [BR:
bna03009
]
Prokaryotic type
GTPases
106454172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
nSTAND1
AAA_29
AAA_21
AAA_16
AAA_23
nSTAND3
Motif
Other DBs
NCBI-GeneID:
106454172
NCBI-ProteinID:
XP_013751792
UniProt:
A0A816Z3X7
LinkDB
All DBs
Position
A7:complement(22924011..22925961)
Genome browser
AA seq
492 aa
AA seq
DB search
MQISSLSIIRHSSPLFLRRAAIHHGGHVARLGIRRSFHLLTLSARRDNPDVSRKPQPSKN
MLRAKHIGKDHSSLAPVLSPDHNPSLLPSQAIGTVATAQANFMRVVVKDGDGEGDDRSSS
SSSSKDGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIENVFQRRSEILDPPV
ANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPLTLALNKCELITEEELESWKMRLRG
WNYEPFFCSVGTKEGLDAIAFVLRNQTSVIVGPSGVGKSSLINILRSSSGGGDVEDENWF
EPIIGNKWFEDQRVGEVSTRSGRGKHTTRNVSLLPITEGGYLADTPGFNQPSLLKVTKHS
LALCFPEIRKMIEEEKCGFKDCLHIGEPGCVVKGEWERYPYYLQLLDEIRVREEFQLRTF
GTKREGDVRYKVGGMGVKQAEPRLQPKKHRRESRKKVKQTMISELDEYEDEESDLDIEDD
PIVQAIENEKER
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcagatatcgtctctctccatcatccgccactcttctcctctcttcctccgtcgcgcg
gcgattcaccacggcggacacgtagctcgactcggaatccgccgcagcttccatctcctc
acactctcagctcgacgagacaaccccgatgtctccagaaaaccccagccgagcaaaaac
atgctcagagccaagcacatcggcaaagaccactcctccttagctcccgttctctctccc
gaccacaatccttcgctcttaccttctcaggccatcggcaccgtcgccaccgctcaggcg
aacttcatgcgcgtcgtcgtcaaggacggagacggagagggagacgatcgttcttcttct
tcgtcgtcgtctaaggacggagttgagctgctctgcgtggtgagagcagtgctgaagaag
ataaggaggagagtgctggttggggataaggttctcgtggggtcaatcgattgggttgat
cggagagggatgattgagaatgtgttccagcggaggtcagagattcttgatcctcctgtg
gcgaatgttgatcacttgcttgttcttttctctcttgatcagcccaagcttgagccgttt
actctcactaggttcttggtggaggctgagtccactgggattccgctcactcttgccttg
aacaaatgcgaactcatcaccgaagaggaattggaatcttggaagatgagactgcgtgga
tggaactacgaaccgttcttttgcagtgtgggaactaaagaggggcttgatgcgattgcg
ttcgtcttgaggaatcagacttctgtgattgttggacctagtggtgttgggaagtcgagt
ttaatcaatatattgaggagcagctctggtggtggtgacgttgaagacgagaattggttt
gagcctataataggtaataagtggtttgaagatcagagagttggtgaagtttcaactaga
agtggtagaggcaaacacacaacgaggaatgtgtcgctgctgccgattactgaaggtggt
tatctcgctgatactcctggatttaaccagcctagtttgctgaaagtaaccaagcattca
cttgcactgtgtttccctgagataaggaaaatgatagaggaagagaaatgtggattcaaa
gattgcttgcatatcggagaaccaggatgtgtagtgaaaggagagtgggaaaggtatcct
tactacctacaactgcttgatgagatcagagtcagggaggagtttcaactcaggactttt
ggaaccaaaagggaaggcgatgttaggtacaaagtgggagggatgggtgtgaaacaagct
gaaccaaggctacagccgaagaagcataggagagagtcgaggaagaaggttaaacaaaca
atgattagtgagctagacgagtacgaagatgaagagagtgacttggacatagaggacgac
ccaattgtccaagccattgagaacgagaaagaaagatga
DBGET
integrated database retrieval system
