KEGG   Brassica napus (rape): 106454493
Entry
106454493         CDS       T04128                                 
Name
(RefSeq) RING-H2 finger protein ATL40
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106454493
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106454493
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    106454493
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-RING_5 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_UBOX zf-RING_16 Prok-RING_4 zf-RING_4 Prok-RING_1 Zn_ribbon_IFT122_C zf-RING_10 PHD RINGv zf-C3HC4_4 PHD_NSD Lysis_col zinc_ribbon_16
Other DBs
NCBI-GeneID: 106454493
NCBI-ProteinID: XP_013752066
LinkDB
Position
A5:1705143..1706787
AA seq 216 aa
MSSDNINNGHGIHPDFWQNAASYHGSSKILIVIILVFSIFILVVCAYHLYPRFVLRGRRR
STFQGHSPTLVTQPPKHGLEIVVIDSLPTFVVEVNGNHDVSATECAVCLALLEEKDAARM
LPNCKHVFHVACVDTWLATHSTCPICRSEVEPNKRLEPEPREGPVGDGASSSDYKSGGSS
VVRLDLFPRILTRERSSDRIDHSRVDQDRVLDLERQ
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctcggacaacataaataatggtcacggaatacatcctgacttctggcaaaacgcc
gcttcttaccatggcagcagcaagattttaattgtcatcatccttgttttttctattttc
atccttgtcgtctgcgcttatcatctatacccaagattcgttctccgcggccgccgtaga
tccaccttccaaggccactctcccaccctcgttactcagccacccaaacatggcctcgaa
atagttgtcattgattctctccctacattcgtggttgaagtcaacggtaatcatgacgtc
tcggctaccgaatgtgcggtgtgtctagccttgttggaagagaaagatgcggcgaggatg
ttaccgaactgcaagcacgttttccacgtggcatgcgttgacacatggctcgcaacacac
tccacttgtcctatttgtagaagtgaagtcgagccgaataaaaggcttgagcctgagcca
agagaaggcccagttggcgacggtgcatcttcgtcggattacaagagtggtgggtcatcg
gttgtgaggttagatttgtttccgaggattttgacaagggaaagatcttcggacaggatc
gatcattctcgcgttgaccaagatcgtgtattagatcttgaaagacaatga

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