Brassica napus (rape): 106454961
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Entry
106454961 CDS
T04128
Name
(RefSeq) polygalacturonase ADPG1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106454961
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106454961
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
106454961
NCBI-ProteinID:
XP_048597178
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Position
A9:complement(36007653..36010952)
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AA seq
432 aa
AA seq
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MARCCVPLAIFLGVLLMLSWCEALSSNVDDGYGHEDGGYESDSLIKLNNDEVLTLKSSDK
PTPESSTVSVSDFGAKGDGKTDDTQAFKKAWKKACSTKGVTSFLVPKGKTYLLKSTQFRG
PCKSLRSFQILGTLSASTKRSDYNKDKNHWLILEDVNNLSVDGGSEGTVDGNGKIWWQNS
CKIDRSKPCTKAPTALTFYNLMNLNVKNLRVRNAQQIQISVEKCNNVNIKNVEITAPDDS
PNTDGIHITNTQNIRVSNSHIGTGDDCISIEDGSQNVQINDLSCGPGHGISIGSLGDDNS
KAYVLGVNVDGAKLTETDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQNYCDKD
KCEQQDSAVQVNNVVYRNISGTSATDVAITFDCSEKYPCKGIVLDNVNIKGGTASCKNAN
VKNQGNVSPQCS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttgttgcgtacctcttgctattttcttaggcgttcttttgatgctctcgtgg
tgtgaagctttgagtagcaacgttgatgatggatatggtcatgaagatggagggtacgaa
tccgatagcttaatcaagctcaacaacgacgaagttcttaccttgaaaagctccgataaa
cccactcccgaatcatcaactgttagtgtatcagacttcggagctaagggagatggaaaa
accgatgatactcaggccttcaagaaagcatggaagaaagcatgttcaacaaaaggagtt
actagcttcttggttcctaaagggaagacttatctccttaagtctactcagttcagaggc
ccatgcaaatctttacgtagctttcagatcctcggaactttatcagcatctacaaaacga
tcggattacaacaaagacaaaaaccattggcttattttggaggacgttaacaatctatca
gtcgacggcggctccgagggcactgttgatggaaacggaaaaatctggtggcaaaactca
tgcaaaatcgaccgatctaagccatgcacaaaagcgccaacggctctaactttctacaac
ttaatgaacttgaatgtgaagaacctgagagtgagaaatgcgcagcagattcagatttcg
gttgagaagtgcaacaatgttaatattaagaatgtcgagatcactgctcctgacgatagt
cccaacacggatggtattcatatcactaacacccaaaacattcgagtctccaattcacac
attggaacaggtgatgattgtatatccattgaggatggatcccaaaatgttcaaattaat
gatttaagttgtggccccggtcacgggatcagcattgggagcttgggggatgacaattcc
aaagcttatgtcttgggagttaatgtggatggtgctaagctcactgagactgacaatgga
gtaagaatcaagacttatcagggagggtcaggaactgcgaagaacattaagtttcaaaac
attcgtatggaaaatgtcaagaatcctatcataatcgaccagaactactgcgacaaggac
aaatgcgaacaacaagactcagcggtgcaagtgaacaatgtggtgtaccggaacataagc
ggtacgagcgcaaccgatgtggcaataacgtttgattgcagtgagaaatatccatgcaaa
ggtattgtgcttgataatgtgaacatcaaaggaggaacagcatcttgcaagaatgcgaac
gttaagaatcaaggcaacgtttctcctcaatgctcttaa
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