Brassica napus (rape): 106455032
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Entry
106455032 CDS
T04128
Name
(RefSeq) syntaxin-125-like
KO
K08486
syntaxin 1B/2/3
Organism
bna
Brassica napus (rape)
Pathway
bna04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106455032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106455032
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106455032
Membrane trafficking [BR:
bna04131
]
SNARE
Syntaxin (Qa)
Stx-PM
106455032
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
106455032
Exosomal proteins of other body fluids (saliva and urine)
106455032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
CCDC-167
Laminin_II
Erp_C
PigL_N
Treslin_STD
PNMA
HTH_25
LarA_C
DUF7201
Motif
Other DBs
NCBI-GeneID:
106455032
NCBI-ProteinID:
XP_013752546
UniProt:
A0A078JWX7
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All DBs
Position
C8:26359690..26360984
Genome browser
AA seq
298 aa
AA seq
DB search
MNDLFSNSFKRNQAQFGDVEAGQETMNLDKFFEDVENVKDDMKGVDTFYKKLQDSNEECK
TVHNAKKVKELRAKMDADVGQVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRS
SVVSGLGKKLKDLMDSFQSLRARMNDEYKETVERRYFTITGEQADEQTIDNLIASGESEN
FLQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIE
SHVAKASSFVRRGTDQLQDARENQKSSRKWTCYAIILFIVVFILLLIPALPHIMLMLK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttattctcaaattcgttcaagaggaaccaagctcagtttggggatgtggag
gcaggtcaagaaacgatgaacctcgacaagttttttgaggacgtcgaaaatgtaaaagat
gacatgaaaggagtcgacactttttacaagaagcttcaagactcgaacgaagagtgcaag
acggtgcacaatgccaaaaaggtcaaggagctgcgagctaagatggatgctgacgtaggt
caggtccttaagagagtcaaaatcattaagcagaagctagaagccttagagaaagccaac
gctaacagccgtaatgtcccgggttgtggacccggttcgtctacggataggacccggtct
tctgtggttagtggtcttgggaagaagctcaaggatttgatggatagtttccaaagtcta
cgtgcacggatgaacgatgagtataaagaaaccgtagagcgcaggtatttcacgataaca
ggagaacaagcggacgagcaaacaatcgataacttgatagcaagcggtgagagtgaaaac
ttcctccaaaaagcgattcaagagcaaggaagaggtcaaatcatggacacgatctctgag
attcaagaaagacatgatgcggtgaaggagattgagaagaatctactggagttgcaccaa
gttttcttggacatggcggctttagtggaagcgcaagggcagcagcttaacaatatagag
agccatgtggctaaggcgagctcgtttgtgagaagagggactgatcagctccaagacgcg
agggagaaccaaaagagctcgagaaaatggacttgttacgctattattctcttcatcgtt
gtgtttatcctccttcttattcctgctctaccccatattatgctaatgttgaaatga
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