Brassica napus (rape): 111197697
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Entry
111197697 CDS
T04128
Name
(RefSeq) peroxisome biogenesis protein 5-like
KO
K13342
peroxin-5
Organism
bna
Brassica napus (rape)
Pathway
bna04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111197697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
111197697
Membrane trafficking [BR:
bna04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111197697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_19
CFAP70_TPR_C
TPR_7
TPR_9
TPR_12
RMD1-3
PPTA
CFAP70_mid_TPR
TPR_20
PEX18_PEX21_C
CABIN1_N
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
111197697
NCBI-ProteinID:
XP_022569860
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Position
A3:complement(5595504..5600787)
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AA seq
730 aa
AA seq
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MAMRDLVNGGAACAVPGSSSSSNPLGALTNALLGSSSKTQERLKEIPNATSSGPGPQFYS
QDQHLSSLPGSELDQPLLQPGAQGTEFFRGFRSVDQNGLGAAWDEVQRGGPMPPMGPMYE
PVQPTFEGPPQRVLSNFLHSFVESSRGGIPFRPAPVPVLGLSQSDKQCIRDRSSIMARHF
FADRGEEFINSQVNALLSSLDIDDGIQARGHMPGRFRELDDYWNESQAVTKPGLHPADSW
ATEFDQHQHGMNHGGPDAWVNSFEQQHGVNGWATEFEQGQSQLMSNQMRSMNMQNLAAME
QTRKLAHTLSQDVNPKFQNSRFLQFVSKMSRGELIMDENEVKPGPAPGDWATEYEQQYLG
PPSWADQFANEKLARGPEQWADEFASANRQQESAEDQWVNEFSKLNVDDWVDEFAEGPAG
GSSADAWANAYDEFLTEKNAEKQNSGVYVFSDMNPYVGHPEPMKEGQELFRKGLLSEAAL
ALEAEVMKNPENAEGWRLLGVTHAENDDDQQAIAAMMRAQEADPSNLEVLLALGVSHTNE
LEQATALKYLYGWLRNHPKYGSIAPPELADSLYHADIARLFTEASQMNPEDADVHIVLGV
LFNLSREFDRAITSFQTALQLKPNDYSLWNKLGATQANSVQSADAISAYQQALDLKPNYV
RAWANMGISYANQGMYKESIPYYVRALAMNPKADNAWQYLRLSLSCASRHDLIEACEARN
LDLLQKEFPL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagagacctcgtcaacggcggagctgcctgcgcagttcccggctcttcttct
tcttccaaccccctcggtgctctcaccaacgcgctacttggttcctcttccaaaactcag
gaaaggctcaaggagatacctaatgccaccagttcaggtcccgggcctcagttttactct
caggaccaacacttaagctcacttcctggttctgagttagatcagcctcttctccagcct
ggtgctcagggaacagagttcttccgtggctttcgatctgtagatcagaatggtctgggt
gcagcttgggatgaagttcagcgtggtggacctatgcctcccatgggacctatgtatgag
cctgtccagcccacatttgaaggaccccctcaaagagttttgtcaaactttctgcattca
tttgttgagagtagccgtggtggcattccctttcgtccagcacctgtccctgttctggga
ttgtcacaaagtgacaaacaatgcatacgtgatcgtagtagcataatggcccgacatttt
tttgccgacaggggagaagaatttatcaattctcaggtaaatgcattactgtcgtcgtta
gatatcgatgatggcattcaagctagaggtcatatgcctgggagatttcgggagctagat
gattactggaatgagtctcaggctgttacgaagcctggtttacatcctgcggatagttgg
gcgactgaatttgaccagcatcagcatgggatgaatcatgggggtcctgacgcatgggtc
aactcttttgagcaacagcatggtgtgaatgggtgggccaccgagttcgagcagggtcaa
tctcaactgatgtcaaaccaaatgagaagtatgaatatgcaaaatttagctgcaatggag
cagactcgtaagcttgcccatacactgtctcaggatgtcaatccgaaatttcagaattca
agattccttcagtttgtttctaagatgagccgcggtgaactcattatggatgagaatgag
gtcaagcctggacctgcccctggggactgggctactgaatatgaacagcagtatctgggg
ccgccaagttgggctgatcaatttgccaatgagaaacttgcacgtggaccagaacagtgg
gctgatgagtttgcttccgctaaccgacagcaagaatcggctgaggaccaatgggttaat
gagttttcaaagttgaatgttgatgactgggtagatgaatttgctgaagggcccgcgggt
gggagttcggctgatgcatgggcaaatgcttatgatgagtttcttactgaaaaaaatgct
gaaaaacaaaatagtggtgtatacgtcttctctgacatgaatccttatgtgggtcaccct
gaaccgatgaaagaagggcaggaattgttccgcaaaggacttctgagtgaagcagcgctt
gctctagaagctgaggttatgaaaaatcctgagaatgctgaaggttggagattacttggg
gttacacacgcagagaacgatgatgatcaacaggcaatagctgcaatgatgcgggcacag
gaggccgatccctcaaatctagaggtgcttctggcgcttggtgtgagccataccaacgag
ttggagcaagcaactgctttgaagtacttatacggatggctgcggaatcaccctaagtat
ggatcaatcgcacctccagagcttgctgattccctataccatgctgatattgctagatta
ttcactgaagcctctcagatgaatcctgaggacgccgatgtgcatatagtgctaggtgtt
ctcttcaatctgtcaagggaattcgatagagcaattacttccttccaaacagctttacag
ttgaaaccaaacgattattctctttggaataagcttggcgcaactcaagccaacagcgtc
cagagtgctgatgccatatctgcttatcaacaggctctggatttaaaacctaattatgtt
cgtgcttgggcaaatatggggatcagttacgcaaaccaggggatgtacaaagaatcaatc
ccttattatgttcgtgcccttgcgatgaatcctaaggcagataacgcttggcaatacttg
aggctctcgttaagctgtgcgtcaagacatgacctaatcgaagcttgtgaggcaaggaat
ctcgatctcttgcagaaagagttcccgctttga
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