Brassica napus (rape): 111197832
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Entry
111197832 CDS
T04128
Name
(RefSeq) elongator complex protein 2 isoform X1
KO
K11374
elongator complex protein 2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
111197832
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
111197832
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_BBS7
NBCH_WD40
MIOS_WD40
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
WD40_RFWD3
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
111197832
NCBI-ProteinID:
XP_013701948
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Position
C6:complement(5728340..5732114)
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AA seq
825 aa
AA seq
DB search
MSENTEVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAIFCPKTAQILTTLPGHKA
SVNCTHWLPSSKFAFKAKHLDRHYLLSGDTDGVIILWELSTNSNNQWRHVLQLPRSHKKG
VTCITAFMCSETDAMFASGSSDGVVNVWDVSFPSQPSEECKVSCLDSISADSKAIVTLSL
AELPQNPGRFTLAMGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPLHSTDEP
TNSIMLVSSSQDKVIRIWKLVLVGDVGSWQREITLASYIEGPVFDSGRFTYQVSVESVLI
GHEDWVYSVEWQPPVDCHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGF
YGGHWSPDGVSILAHGYGGSFHLWRNVSSSKEFENWQMQKVPSGHFAAVTDITWARTGEY
LLSVSHDQTTRVFSSWKSDEENEHWHELARPQVHGHDINCVAIVQGKGNHRFVSGAEEKV
VRVFEAPLSFLKTLKHTCAGGEGSFPEDLQADVQVLGANMSALGLSQKPIYLHSSSEPLE
RNGGGEGLETFETVPEAAPVELKEPPIEDQLAFHTLWPESHKLYGHGNELFSLCCDHNGT
LVASSCKAQSAAMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSV
FSIQRTDDGDVSHKLMAKVEAHKRIIWACSWNPYGHQFATSSRDKTVKIWSIEKDAHVKQ
VLALPQFGSSVTAVAWTGLDQKEKSGCIAVGMESGLIELWNIKIKETEEEGTTATAALAL
RLEPLMCHVSAVNRLAWRPTESNQSLLRLTSCGDDNCVRVFDFKF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaacaccgaagtggaagcgaagagagtgttcataggagcaggatgcaacaga
gtcgtcaacaacgtctcttggggagcttctggtctcgtttccttcggtgctcaaaacgcc
gttgctattttctgccctaagacagcccagattcttacaacgcttccaggtcacaaagct
tctgtcaattgcactcattggttacctagttccaagtttgctttcaaagccaagcatttg
gaccggcattatctgctctcaggtgatacagatggtgtcatcatcctttgggagctatca
actaacagtaacaatcagtggagacatgtactacaactcccaaggtctcacaagaaaggt
gtaacttgcatcaccgcgtttatgtgttctgaaaccgatgcaatgtttgcttctggttct
tcagatggagttgtgaatgtctgggatgtttcttttccatcccagcctagtgaggagtgt
aaagtttcgtgcttggactccatctctgctgactccaaagcaattgtaacgctttcgtta
gcggagctgcctcaaaatcctggaagattcaccctcgccatgggtggattagacaacaaa
atcaaactgtactgtggagaaagaacggggaagttcacttctgtctgtgagcttaaaggc
cacacggactggatccgaagtttggacttttcattaccgttacactcaacagatgaaccc
accaatagtatcatgcttgtgagttcttcccaggacaaagtcattcgaatctggaagctt
gtgttagtaggtgatgttggctcatggcaaagagagatcactctggcttcttacattgaa
ggtcctgtttttgattcagggaggttcacgtatcaggtttcagtggaatctgttcttatt
ggacatgaagattgggtctattccgtggagtggcaacctccagtggactgccaccaacca
ttgagcattttatcggcttcaatggacaagacgatgatgatttggcgacctgagaagaaa
acgggtgtgtgggtgaacgttgtgtgtgtaggagagcttagtcactgtgctcttggcttc
tacggtggccactggagcccggatggtgtgtcgatcctggctcatgggtatggtggatct
tttcatctctggagaaatgttagtagcagcaaagagtttgaaaactggcagatgcagaaa
gtcccttcaggtcattttgctgctgtgactgacatcacgtgggctagaaccggcgagtac
ttgctatccgtgagccacgatcagaccactcgggtgttctcatcatggaagagcgatgag
gagaatgagcattggcatgaactggctcgtcctcaggttcatggtcatgacattaactgt
gtggctatagttcaaggtaaaggcaaccaccgttttgtaagtggagcagaggagaaagtt
gtgagagttttcgaggctcctctgtctttcttaaagacactgaaacacacttgtgccgga
ggagaaggaagcttccctgaggatttacaagcagatgtgcaggtccttggcgcaaatatg
tctgctcttggtttatctcagaaacctatctacttacactcttctagtgaaccgttggag
agaaatggaggaggagaaggtttggagacatttgaaacggttccagaggctgctccagtg
gagttgaaggagcctccaatcgaagaccagcttgcgtttcatactttatggcctgaatct
cataaactctatggtcatggtaatgaactcttttctctctgctgcgaccacaacggaacc
cttgttgcttcatcctgtaaggctcagtctgctgccatggcggagatatggctatgggaa
gttgggacatggaaagctgttggtcgtttgcaatcccacagcttgacagtgacacacttg
gagttctcttatgacgacactctgctcttgtccgtctccagagatcgtcacttctcagtg
ttctctatccaaagaacagatgatggagatgttagtcacaaactcatggcaaaggtcgaa
gcacacaagaggatcatctgggcatgttcatggaacccatatggccatcagttcgcaact
tcatcaagagacaagactgtgaagatctggtccatcgagaaagacgctcacgtcaaacag
gttcttgccttgcctcagttcgggagcagtgtcacagccgtggcttggacgggactagac
cagaaggagaagagcgggtgcatagctgttgggatggagagtgggctgattgagctgtgg
aacataaagattaaagaaacagaggaagaaggtacaacggcaacagcagctcttgctctg
aggcttgaaccgttaatgtgtcatgtctcggccgtgaaccggttagcatggagaccaacc
gagagtaaccagagtttgctgaggttaacttcttgtggggatgataattgtgtgagagtt
tttgacttcaagttctga
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