Brassica napus (rape): 111198033
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Entry
111198033 CDS
T04128
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
bna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111198033
09124 Replication and repair
03420 Nucleotide excision repair
111198033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
111198033
03400 DNA repair and recombination proteins [BR:
bna03400
]
111198033
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111198033
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111198033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
X-Tfes_XVIPCD
Motif
Other DBs
NCBI-GeneID:
111198033
NCBI-ProteinID:
XP_022566521
LinkDB
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Position
C8:complement(29027771..29034307)
Genome browser
AA seq
303 aa
AA seq
DB search
MASVASKLYSDDVSLLVLLLDTNPLFWDTTSTTFSQFLSHVLAFLNAVLGLNQLNQVVVI
ATGYSSCDYVYDSSLTSNVSSESRGARMPALFGSLLEKLEDFIGRDAELAEGDEHVDRIA
SSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPI
DSCYIGTQNSAFLQQASYITGGVHHAPKQLDGLFQFLTTIFATDLHTRGFVQLPKPVGVD
FRASCFCHKKTIDMGYVCSVCLSIFCEHHKKCSTCGSVFGQSKLDAANASSSVNDRKRRA
PDS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgttgcttctaagctgtattcagatgatgttagtcttctagtgttgttgctt
gatacgaatcccttattctgggacactacatcgactaccttctctcagttcctctctcat
gtgcttgcgtttctgaacgcggttttggggttgaatcagttgaaccaagttgtggtgata
gctactgggtacagttcatgtgattacgtttatgattcttctttgacgtcgaatgtgagc
tctgagagcaggggagctagaatgcctgctctttttggctctttgctggagaaattggaa
gattttattggcagagatgcggagctcgccgagggggatgagcatgtggatagaattgct
tcttctctcttgtcagggtcgctctccatggctctctgctatatacagagggttttccgt
tctggacatcttcatccccagcctcggattctatgcttgcaaggttccccagatggcccg
gaacaatatgtagctgtaatgaactctatcttctctgcccaacgccttatggttcccatt
gattcctgttacataggtacacagaactcagcatttttgcagcaggcatcttacataacc
ggcggagtacatcatgcacctaaacagttggatgggctgtttcagtttctaacgacgatc
tttgcaactgatttgcacacccgcggttttgtacaacttcctaaacctgtaggagttgat
tttcgagcatcgtgtttttgccacaagaagactatagatatggggtacgtatgttcagtg
tgtctgtcaattttctgtgagcatcacaagaaatgttcaacgtgcgggtctgtttttggt
cagtctaaacttgatgctgccaatgcttcatcatctgtcaatgataggaagagaagagct
cctgattcctaa
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integrated database retrieval system
