Brassica napus (rape): 111198296
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Entry
111198296 CDS
T04128
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111198296
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
111198296
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
111198296
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111198296
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: Other
VPS15 family
111198296
Membrane trafficking [BR:
bna04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111198296
Autophagy
Autophagosome formation proteins
PI3K complex
111198296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
VPS15-like_hel
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
HEAT
PK_Tyr_Ser-Thr
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
NBCH_WD40
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML_2
Adaptin_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Vac14_Fab1_bd
Tti2
HEAT_EZ
APH
Motif
Other DBs
NCBI-GeneID:
111198296
NCBI-ProteinID:
XP_048637365
LinkDB
All DBs
Position
A1:complement(4025365..4031664)
Genome browser
AA seq
1477 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DSIDLREYERRLVKIKDVFLSLEHPHVWPFQFWQETDKAAYLVRQYFFSNLHDRLSTRPF
LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFYDTRERRLCYLAPERFYEHGGETKVAQNAPLKPSMDIFSVGCVIAELFLEGQP
LFELAQLLAYRRGQHDPSQHLEKIPDPGIRKMILHMIQLEPEARLSAENYLQNYVGVIFP
NYFSPFLHTLYCCWNPLPSDMRVATCHGIFQEILKKMMENKPGDEMGIDSPLPSHPVNAR
NVQETFANQKLNTSKDLIRDTVNSKDETLYSISDALKKNRHPFLKKITMDDLGTLMSLYD
SRSDTYGTPFLPVEVNMRCEGMVLIASMLCSCIRNIKLPHLRREAILLLRSCSLYIDDED
RLQRVLPYVVSLLSDTTAIVRCAAMETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPDD
PEESVRICYASNIAKLALTAYGFLIHSFQLSNVGVLNESTSPQMSTTPATELQKANGDAQ
LSQLRKTIAEVVQELVMGPKQTPNVRRALLQDIGELCFFFGQRQSNYFLLPILPAFLNDR
DEQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEAVIVNALDCLSILCKSSFL
RKRALLQMIECVYPLLYYPSQWVRKAVVTFIAACSEFLGAVDSFAFIAPVIRPFLSRLPA
SIASEEGLFSCLKPPVTREAVYRILETARKPEIAEKQRKIWYSTSPQSGTLNLLEHGAEQ
KKSVEGKKPIMNASQQQEVQGKYAEKDAKLRIPRNPRLNASNTVELRDHLNQEKLQFSGL
MAPYMSGMNNVTEPEGIPLYSFNMDKRAATNPPVASESSLQMNSLGMSSLSVPWMDSMSK
SFNLASSVPVPKLVSGSFHVGTNPKQFYRVVHEPESRENEQMSSVISKFQDLGVSTSSKS
ASVTSEDASSISDLVGEPSPSRTSVPDSGWKPRGVLVAHLQEHRSAVNDIATSSDHSFFV
SASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGMCTTMLRNSTQVVVGASDGVLHMFS
IDHISRGLGNVVEKYSGIVDIKKKDVKEGALLSLLNYTSDSLSGPMVMYSTQNCGIHLWD
TRSDIDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTLWDLRFRVPVYSWQYPIIC
PIEKMCLCFLPPSVSLSTTMRPFIYVAAGFNEVSLWNADGGICQQVWRVANYENETNVSE
FQWKLPSSKANPKANIRKNMSSKYRIEELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIR
RWDYSSPERSYCICGPSLKGVVNDDFYELKTNSGVQFVQETMRRPLATKLTAKAVLAAAA
TDTAGCHRDSVQSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaaaatcgctcgaacgacgcaagtctcggcgacggagtactacctccacgac
ttgccttcctcctacaatctcgtcctcaaggaggttctaggccgcgggagattcttcaag
tcgatcctctgtaagcacgacgaaggtttggtcctcgtcaaggtctatttcaagcgcggc
gactcgatcgatctcagggagtacgagcggcgtttggtgaagataaaggatgtgtttttg
tctctggagcatcctcacgtctggccttttcagttttggcaagagactgataaagcggct
tatttggtgaggcaatactttttcagtaacctgcatgatcggttgagtactcggcctttc
ctcagtcttgtggagaagaaatggttggcgtttcagttgcttcttgctgtgaagcagtgc
catgagaagggtatatgtcatggtgatatcaagtgcgagaatgttttggtcacttcctgg
aactggctttaccttgctgattttgcgtccttcaaacctacatacattccttatgatgat
ccttcggacttttcctttttctatgatacaagggaacgaaggctttgttatctggctcca
gagagattctatgagcatggaggtgagaccaaagttgcacaaaatgctccattaaagcca
tccatggatatattttctgtggggtgcgtgatagcagagctttttcttgagggtcagcca
ctatttgaacttgctcagcttctcgcttatcgcagaggacaacatgatcctagccaacac
cttgaaaagattcctgatcctggaattcgcaagatgattcttcatatgattcagttagaa
cccgaagcacgcctatcagctgaaaactacctgcaaaattatgtgggagttattttccca
aactacttctcaccatttctgcacactttgtactgttgttggaatccacttccttcagat
atgagggtagcaacttgccatggcatatttcaagaaatacttaagaagatgatggaaaat
aagccaggtgatgagatgggtattgattctcctttaccttcacatccagtgaacgcaaga
aatgtacaagaaacttttgcgaatcagaaactgaacacctcgaaggacttgataagggat
actgtaaactccaaggacgagaccctttactctatttctgatgcactcaagaaaaatcgc
catcctttcttgaaaaagataacaatggacgatttgggcacactgatgtctctctatgat
agccgttccgacacttacggaaccccttttctaccggtagaagttaacatgagatgcgag
ggaatggttctgatcgcatctatgctctgttcctgtatccgcaatatcaagttgcctcat
ttgaggagggaagccatacttctgctgaggtcttgctctttgtatattgatgatgaagat
cgcttacaacgtgtacttccatatgttgtttccctgctttctgatacaacagcaatcgtg
cggtgtgctgccatggaaactctatgtgacattctgccgcttgtccgagattttcctccc
agtgatgcgaagatcttcccagagtatatatttccgatgctctccatgctccctgatgat
ccagaagagagtgtgaggatatgttatgccagcaatattgcgaaacttgctcttactgct
tatggattcttgatacattctttccaactgagtaacgtaggggttcttaatgaatcaact
tcgccgcagatgtcaactacacctgctactgagttgcaaaaggcaaatggcgatgcacag
ctttcacagcttaggaaaactattgccgaagttgttcaagagcttgttatgggtccaaaa
caaactccgaatgttagaagagcactccttcaggacataggggagctctgctttttcttt
ggtcagaggcagagtaattactttctactccccatcctccctgcctttcttaacgacaga
gacgaacagctaagatctgtattctttgagaaaattgtttatgtatgcttctttgtcggc
cagagaagtgtggaggaatatctattgccttatattgatcaagctctaagcgatcagaca
gaggctgtcattgtcaatgcattggattgcttatccatactgtgcaagagtagcttcttg
cggaagagagctcttctccaaatgatagagtgcgtttatcctttgctgtactatccatct
caatgggtaaggaaggcagtcgtcactttcatcgctgcctgtagtgagttcttaggtgct
gtcgactcttttgcctttattgcgccagtaatacggccctttctcagtagacttcctgca
tcaattgcttctgaggaaggtttgttttcatgcctaaagcccccagtcacaagggaagcc
gtttaccgtatcttggaaactgccaggaaaccagaaatcgccgaaaaacagcggaagata
tggtacagtacttcacctcagtctgggaccttgaacttgttagaacatggggcggaacag
aagaagagtgtggaagggaaaaaaccgattatgaacgcatcacagcaacaagaagttcaa
ggaaagtatgcagagaaagatgctaaactgagaatcccgagaaacccaagactcaatgct
tctaacacagttgagcttcgtgatcacttgaatcaggagaagttacagttctctgggctt
atggcaccatacatgtctggtatgaataacgtaactgaaccagaggggatacctctctat
tcgtttaacatggacaaacgagccgccacgaatcctcctgtggcttctgagtcttcattg
cagatgaactctctggggatgagttcgttgtcagtaccatggatggattccatgagcaag
tcatttaacttggctagttcggttccggtgcctaagctggtttctggatcattccacgtt
ggtaccaatcctaaacagttttacagagtggtacatgagccagaaagcagagaaaatgag
caaatgtcctcagtcatcagcaaatttcaagacctcggtgtatccacctcttcaaaaagc
gcttctgtgacttcagaagacgcgtcttcaatatcggatctcgtaggagaaccatctccg
tcgaggacttcggttccggattcaggttggaagcctcgtggagtattagtcgctcatcta
caagagcaccgctctgctgtcaacgacattgccacttcaagcgatcatagcttctttgtt
agtgcatcagatgattctacagtaaaggtgtgggactctagaaagctggaaaaggacatt
tcgttcaggtcaaggctaacgtatcatctcgagggaagcagagggatgtgcacaacaatg
cttaggaattcaactcaagttgtcgttggagcctccgatggtgtgttacatatgttttcc
attgaccatatctccagaggcttggggaacgtggtggagaagtactcaggcattgttgat
atcaaaaagaaggatgttaaagaaggcgctttgctttctcttttgaactacacctctgat
agcctatctggcccgatggtaatgtatagtacccaaaactgtgggatccacctttgggat
acaagatcagatatagatgcgtggacgctgaaagcaaaccctgaagaaggatacgtgtct
tctttggtgacaagcccctgcgggaattggtttgtgtctggttcttcaaggggagtactt
actctttgggatttgaggtttcgtgttcctgtatattcgtggcaataccctataatatgc
cccatagagaagatgtgcctctgctttcttcctccgagcgtctcgctgtccaccacgatg
agaccttttatttatgttgctgctggtttcaatgaagtttcactctggaatgcagatgga
ggcatctgtcaacaggtatggagagtagccaactatgaaaatgagacgaatgtttccgag
tttcagtggaagctaccaagcagtaaggcaaatcccaaggcgaatattcgcaagaacatg
agctccaagtatagaatcgaagagttgaacgagcctcctcctcgtcttcctggtatccgc
tcgttgcttcctttacccggaggcgacttgttaacaggtggtactgacttgaagattcgg
cgttgggattactccagccctgagagaagttactgtatctgtggtccgagtctgaaggga
gttgtaaatgatgatttctacgaactcaaaaccaactctggagtgcaatttgttcaggag
acaatgaggcggcctctggcgaccaaactgacggcaaaggcagtacttgcagcggctgca
acagacacagcaggatgtcaccgtgactcagttcagtctttggcatcagtgaagctgaac
cagagactgttgatttcaagcagcagagatggagcgatcaaggtctggaagtaa
DBGET
integrated database retrieval system
