Brassica napus (rape): 111198535
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Entry
111198535 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 12
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111198535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
111198535
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111198535
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GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
111198535
NCBI-ProteinID:
XP_022559795
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Position
C6:complement(27787140..27792042)
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AA seq
653 aa
AA seq
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MNHQSSRNARLNTGNVVRPSTLSIKSVRGWLEKMFWKMTRIVNWWKTVLFVCVLALAVDP
LFFFIPVIDSHKFCFTLDKKLGVAVCVLRTLIDVFYVIHIIFHFITELVAPRSRASLIGE
LVVHSKVIRKRLFFFYFSVDIVSVLPIPQVMVLTLLSRKQKTSLVSKEILKWVMFCQSLP
RSIRIYPIFREVTRASGTVAQTKWVGAALNLFFYLLPTHVIGAFWYLSAIEKKETCWREA
CAKITECDLTNLLCARGAGGDNSGFLNTSCPLIDPEQITNSTVFNFGIYTDALKSGVVET
RDFPRKLLYCFWWGLRNLSALGQNLETSNSAGEVFFAIIICVSGVLLCAVLIGNVQKYLQ
STSIRVDEWEAKKRDTEQWMSSEDLPDYLKERIRKWEYDEWEKNSGTKREAHLPSLPKDL
RVEAKRIIYLYSLENVPWISFIDDDWLLNEMYDRVKPVFYWEKSHILGIGDPVKEMLIVM
RGELESVPEYCETSRYSNLQIRLMKGDVWGKLLFWALDPHTSPSLPISNRNVMTLTYVSG
FTLSADDLKFLAYHLRRYHSVKLQHIKHIFRCHSKSWRSWAAFYIQAAWKAHCRRKASKI
LQDTQRNLGATLYASRFVSKTLRYRQDDSAEFPSFPEMLPDKPADPEFSKKEA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccagagtagtagaaacgcgaggcttaatactggcaatgtggtgagaccttca
actctatctatcaagagtgttagaggatggttggagaaaatgttctggaagatgacacgt
attgtaaactggtggaagactgtccttttcgtttgcgtgcttgctttagcagttgatcct
ttgtttttctttatccctgtgattgattctcataagttctgcttcactttggacaagaag
cttggtgtagctgtttgtgtccttcgtactcttattgacgtattctatgtgattcacatc
atttttcattttataactgaactcgttgctcctcgttctcgagcgtcattaataggcgag
ttagttgtgcattctaaggttataaggaaaagacttttcttcttctacttcagtgttgac
attgtctctgttcttcccattccccaggtgatggttcttactctcctttcaagaaagcaa
aagacgtcactggtgtccaaggagatactaaaatgggttatgttttgtcaatctttaccg
agaagcatccgtatctatccgattttcagagaagtgacaagagcttctggtacagtagct
caaacgaagtgggttggagctgctttaaaccttttcttttacttgttgccgactcatgtg
attggggctttctggtacttgagtgcaattgaaaagaaagagacatgttggcgtgaagcg
tgtgcaaagataaccgaatgtgacctaacaaatctcttatgtgcacgaggtgctggtgga
gacaacagtggtttcctaaacacttcatgcccattaattgaccctgagcaaatcacaaat
tccacagtttttaactttggcatctacactgatgcattgaaatctggggtggtagagacg
agggattttccaaggaagctcttgtactgcttttggtggggactgcgaaatcttagtgcc
ttgggccaaaacctagagacaagcaactctgcaggggaggtcttttttgctatcatcatt
tgtgtctctggtgtactcttgtgtgctgtgctaattggaaatgttcagaagtacttgcaa
tcaactagtataagagtagatgaatgggaggcgaagaaaagagacacagaacaatggatg
tcttctgaggacctaccagactatctaaaggaacgcattaggaaatgggaatatgatgaa
tgggaaaaaaacagtggcaccaaaagggaagctcatcttcctagtcttccaaaagaccta
agggtcgaagccaaacgcattatatacttgtattcattggagaatgttccttggatctcc
ttcattgatgatgattggctactaaatgaaatgtacgatcgggtgaagcctgtgttctac
tgggaaaaaagccacatattgggaataggtgacccggttaaggaaatgcttattgtaatg
agaggcgaactggaaagcgtgccagaatattgtgaaacatctagatacagcaatttacaa
attcgactcatgaaaggtgatgtatggggaaaacttctcttttgggctcttgatccccat
acttctcctagccttcccatctcaaacagaaacgtaatgactcttacctatgttagcggc
ttcactctctcggctgatgatctcaagtttctagcctaccatttgagacgctatcatagc
gtcaaactccaacacatcaaacacattttcagatgccattcaaagtcttggcgatcatgg
gcagcattctacatacaggcagcatggaaagcacattgccgaaggaaggcttctaagata
ttacaagacacacaacgcaatctgggagcaacactttatgcgtcgaggtttgtctctaag
actttgcgatatcgacaggatgattcagcggaatttcccagctttccagagatgttacct
gacaaaccagccgatcccgagttctcaaagaaggaagcatag
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