Brassica napus (rape): 111198703
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Entry
111198703 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
111198703
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111198703
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
111198703
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GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
ResIII
AAA_22
Utp25_C
Motif
Other DBs
NCBI-GeneID:
111198703
NCBI-ProteinID:
XP_022543498
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Position
A1:25584353..25589111
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AA seq
832 aa
AA seq
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MSKLLKSTATMSPGAGESSSMAAKKKKKRSHKRKREEELERLDSLPWSSTIPIGEDDEGE
TFSTLFAGSDELDGGFLSLEEIDEADYNLADFPVDESVKGKKGLKSKKQAHDNNDGDEEE
AVDEITEDKVGEEEGKGEGVVESPKKKEKKYKNKKKKERRKRVKEADKVQDSPAAVSCDE
ENKAEELDGEEEEIPPDFSAWSLMRLHPLLMKSIYHLGFKEPTKIQKACFTVAAFQGKDV
IGAAETGSGKTLAFGLPILQRLLDEREKVGKLFALKGEEAQKYSADGYLRALIITPTREL
ALQVTEHLKNAAKNLGVRVVPIVGGMSSAKQERLLKGKPEIVVGTPGRLWELMSAGEKHL
VELQCLSFFVLDEADRMVEGGHFRELQSIIDMLPVTDKPSEGKTQSSDTVSDAPKKKRQT
FVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDSVAIVDLTTAAILA
PKIEESFIRCEEEDKDAYLYYLLSVHGQGRTIVFCTSVAALRHICALLKILGVDVCKLNA
DMKQQARLKAMDRFRSSENGVLVATDVVARGIDIKNVRTIIHYQLPHSAEVYVHRSGRTA
RAFADGCSIALIAPNDTSKFYTLCKSFSKESVKIFPLDSSLMPDVKKRLSLARQIDQIER
KGSRERVDRTWLEKHAELMELELDEDESEEEKVDNVRQRKATSAQLKKLKEELSSLLSRP
MQPKKFSDRYFAGRGMSPLLQNQLAELTNQKQQQQVASGGDKKRRKLVVVSQNCIEPLQA
LRDGSKEVMSMKGQSADRRRDIATLRKKKKEEKIGRRDQRRDQKKKRKLMAS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcttctcaaatcaacggctaccatgtctcccggcgccggagaatcatcctcg
atggcggcgaagaagaagaagaaaagaagtcataagaggaagcgagaagaagagctcgaa
cgcttggattcgcttccgtggagctctactatacctatcggagaagacgacgagggcgaa
acgttctccaccctcttcgcgggttcagacgagcttgacggaggttttctctcgcttgag
gaaattgatgaagctgattacaatcttgcggactttcctgtggatgaaagtgttaaagga
aagaaagggttgaagtcgaagaagcaagctcatgataataatgatggtgacgaagaagag
gctgtggatgagataactgaagataaagtaggagaagaagaaggtaaaggagagggtgtt
gtggagagtcctaagaaaaaagagaagaaatataaaaataagaagaagaaggagaggagg
aagagggttaaggaggctgataaggttcaggattctcctgctgccgttagctgtgatgag
gagaacaaagcagaggagctagatggtgaagaagaagagattcccccggactttagtgca
tggagtttgatgagactccatccactactcatgaagtctatataccatctcggattcaag
gagccgacaaaaatccagaaggcttgttttaccgttgcagcgtttcagggaaaggatgtt
attggtgccgcggagacagggtctggaaagacgcttgcttttgggttgcccatactccaa
cgcctcttagatgagcgggagaaggttggcaaactgtttgcattgaagggagaggaagcg
cagaaatattctgcagatggctacttacgagctcttatcatcactccgactagggaactt
gctctacaggtgacagaacatcttaagaacgctgccaaaaatctaggtgtcagggtcgtt
cctattgttggtgggatgtcatcagcgaagcaggaaaggcttctgaaaggaaaaccagaa
atagttgttggaactccggggaggttatgggaactcatgtcggccggagaaaagcatctt
gtagagctgcaatgcttgtcgttctttgtgttggatgaggctgaccgcatggttgaaggc
gggcatttccgggagctgcagtctataattgacatgcttccagtgacagataaaccaagc
gaagggaaaacgcagagttccgatacagtttcagacgccccaaagaagaaaagacaaaca
tttgttttctcagctaccatagcactgtcctctgacttccgcaaaaagctaaagcgcggc
tcctccaagtcaaagcagtcatcgtctggtgaagtaaattccattgaggttttatctgaa
agagctggaatgagagatagtgttgccatcgttgatctgacgactgctgctattttggca
ccaaagattgaagaatcttttattaggtgcgaagaggaggataaagatgcgtacttgtat
tatcttctgagcgtccatggacaagggcggacaattgttttctgtacatcagtggcagct
ttgcgtcatatctgtgcgcttctaaagattcttggagtcgatgtttgcaaactcaacgca
gatatgaagcagcaagctcggttgaaggcaatggaccgtttccgttcaagcgaaaatgga
gtactcgtggcaacagatgttgtagcaaggggaattgatattaagaatgtccgaactatt
attcactaccagcttccacattcagcagaagtttatgttcatagaagtggaaggacggct
agagcattcgcagatggatgcagcatagctttaattgctccgaatgatacatcaaagttt
tacacgctatgcaagtcattctctaaggaaagcgtaaagatattccctttggatagctcc
ctaatgccagatgtgaagaagcggttgtctctagcacgtcaaatagaccagattgagcga
aaagggtcgcgggagagagtagacaggacctggctcgagaaacatgctgagttgatggaa
ctggagttggacgaagatgaaagcgaagaggaaaaagtagacaatgttaggcagaggaaa
gcgacctcagcacaacttaaaaagctgaaggaggaacttagctcgctattatcacgtccg
atgcagcctaagaaattttcagaccgttactttgctgggcgtggtatgtcgccactatta
cagaatcagctagcagagttaacaaatcagaagcagcagcaacaagtggcaagtggtgga
gataaaaagagaagaaagcttgtggtggtttcccagaattgcatcgaacctcttcaagcc
cttcgtgacggtagtaaagaggtgatgagcatgaaaggtcagagtgcagataggagacgc
gatatagctacattgaggaagaagaaaaaggaagagaagataggtcggcgtgatcagcga
agggatcagaagaagaagagaaaactaatggcttcttaa
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