KEGG   Brassica napus (rape): 111198712
Entry
111198712         CDS       T04128                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111198712
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     111198712
SSDB
Motif
Pfam: Glyco_hydro_28 Beta_helix BA3454
Other DBs
NCBI-GeneID: 111198712
NCBI-ProteinID: XP_048591249
LinkDB
Position
A6:23864335..23866180
AA seq 397 aa
MGVHFGISVLFVVCLLGLSANAKDFTITAPPGSDITSLLLKTFNEACQFPTRSSVLIPKG
EYKLRQIEMMGPCKAPIRITLQGTVKADGNVNGNDYWVAFRRINGFKLNGGGIFDGEGNA
AWRANNCHKMALTQCKKLPISIRFDFVTDAKIRGITSLDSKNFHINVLGARNMTLEEITI
IAPEESPNTDGIHVGRSVGVQIINSNIKTGDDCISIGDGTRDLLVERVTCGPGHGISIGS
LGLYVKEEDVTGIRVVNSTLINTDNGVRIKTWPSAACSTTASGIHFENIILKNVTNPILI
DQEYCPWNRCNKNKPSTIKLVDISFKHIRGTSGNKDAVKLLCSKGFPCKNVQIGDIDIKY
TGADGPATFQCSNVSPTLMGTQVPKACSSPVTKLPGQ
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgggtgtacattttggaatatccgtattatttgttgtttgtttgctaggtttatcagca
aatgctaaagatttcacaatcactgctcctccaggttctgatatcaccagcttattgttg
aaaacattcaatgaggcatgccagttcccgaccaggagtagcgtattgatccctaaaggt
gaatacaagcttcggcaaatagagatgatgggtccatgcaaagctcccataaggattact
cttcaaggcactgtgaaagctgacggaaacgttaacgggaatgactactgggtcgctttc
cgcaggattaatgggtttaagttgaacggaggtggtatctttgacggtgaaggtaacgct
gcatggagggctaataattgccacaaaatggcattaactcagtgcaagaaactccctatc
agcatacggtttgatttcgtgactgacgctaagataagaggcataacctcgttggattca
aagaacttccacattaacgtgctcggagcaaggaacatgacattggaagaaatcacgatc
attgcccctgaagagagtcccaacaccgacggaatccacgtgggaaggagtgttggagtc
cagatcatcaactcaaacatcaaaacaggagatgactgcatctctattggagacgggacg
agagaccttcttgtcgaaagagttacatgcggtccgggacatggaatcagtattggaagc
ctcggattatacgtgaaggaggaagacgtcactggcatcagggtcgtaaactccaccctc
ataaacactgacaatggtgtaaggatcaagacatggccgtctgcagcttgctccaccacc
gcctcgggtatccattttgagaatattatcctcaagaacgttaccaaccctatcctcatc
gaccaagagtactgcccctggaaccgatgcaacaagaacaaaccatcaacaatcaagctg
gtggacataagcttcaagcatatcagaggaacatcagggaacaaagacgccgttaagctt
ttgtgcagcaagggatttccgtgcaagaacgtgcagattggtgacattgacattaagtac
accggagccgatggtcctgcaacattccaatgctccaacgtatctcccacgttgatggga
actcaggtccctaaagcatgtagcagcccagtgactaagctaccaggccagtaa

DBGET integrated database retrieval system