Brassica napus (rape): 111199218
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Entry
111199218 CDS
T04128
Name
(RefSeq) probable ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
111199218
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
111199218
Ribosome biogenesis [BR:
bna03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
111199218
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_31
Methyltransf_25
GCD14
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
111199218
NCBI-ProteinID:
XP_022544446
LinkDB
All DBs
AA seq
523 aa
AA seq
DB search
MAQLLSFRVYLSAETQKASPESFKRTQKTRKPFTPGQRGPVTPVRKPQNLNLEVSPHRAV
SAVRLMRIEFGGAFADLLNEKGKGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGTI
RWRRYLDHLIGSLCHNERTFRNMEPLLLQILRIGFYEIIKLDMPAYAVVDENVRLAKIAL
RPGAGDLVNGILRKLVSLKEKDALPLPKVEGDDRAQARALATLHSHPVWMVRRWVKYLGL
DEATKLMTWNNTDPGFSLRANMGRGITRSDLVERLNSLKVPHELSLHLEEFVRIKTGLQM
VVQAGLLKEGICSVQDESAGLVVSVVKPQPGDRILDACAAPGGKTLFMASCLKRQGMIYA
MDVNEGRLRILGETAKSHQVNGLITTIHSDLRVFAETKEVQYDKVLLDAPCSGLGVLSKR
ADLRWNRKLEDMEELTKLQDELLDSASKLVKPGGFLIYSTCSIDPEENQGRVEAFLLRHP
EFSVDPVDRLVPSSFVTPQGFFLSNPVKHFLDGAFAARLVRAL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaactgctctcgtttcgcgtctatctctcagccgaaacgcagaaagcttctcca
gagtcgtttaagcggacccaaaagactcgcaaaccgtttacacccggtcaaagaggtccg
gtgactccagtgaggaaacctcagaatctgaatttggaggtttctccacatagagctgta
tctgcggtcagattgatgagaattgagttcggtggtgcgtttgctgatcttttgaatgag
aaaggcaaagggtctgggagcaatgagatgagttatgttgaaagaactatcggttttcga
acaagagatttggatgaccgtgatcttagactggttactgatgttgttggaggaacaata
aggtggaggaggtaccttgatcatctcattggttccctttgccacaacgaacggacattt
cgaaatatggagcctcttctgttgcagattctccggattggtttctatgagatcattaag
cttgacatgccagcatacgctgttgtagatgagaacgtaaggcttgcaaagattgccctt
agacctggtgctggagatcttgtcaatgggattcttcgtaagcttgtctctcttaaggaa
aaagacgcccttccgttacccaaagtggaaggggatgatcgtgcacaagcacgtgcactt
gctacacttcattcacaccccgtttggatggttaggcgatgggtaaagtatcttggcttg
gatgaagccactaagctgatgacatggaacaacactgatcctggattcagcttaagggcc
aatatgggaaggggcattacaagatcagatcttgtggagcgtttgaactctttaaaggtt
ccacacgaactgtccttacacttggaggagtttgtccgcatcaaaacaggattgcagatg
gttgtgcaagctggtttactcaaagaaggcatatgctctgttcaggatgagagtgctgga
ctagtagtctcggtggtgaaacctcagccaggagataggatactggacgcatgtgctgct
cctggagggaagacccttttcatggcatcttgcttgaaacgccaaggtatgatatatgcg
atggatgtgaatgaaggacggcttagaatccttggggaaacggcaaagtcacaccaagtt
aatggacttatcacaaccattcattccgatctccgtgtcttcgctgaaaccaaagaggta
caatatgataaagtgttgcttgacgccccgtgttctggactcggtgtcctctccaagaga
gcggatttgcgctggaaccgtaaactagaggacatggaagaacttacaaaattacaggat
gagcttcttgattctgcctccaaactggtgaagcctggtgggttcttgatatacagtact
tgctcgatagacccggaagaaaatcaaggaagggttgaagcgtttctcctaagacatcct
gagttctcggtagatccagtagacagattagttccatcaagttttgtaactccgcaaggc
ttctttttatccaacccagtgaaacacttcttggatggagcgtttgcagctcgtctggtt
agagccttatga
DBGET
integrated database retrieval system
