Brassica napus (rape): 111199416
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Entry
111199416 CDS
T04128
Name
(RefSeq) putative RING-H2 finger protein ATL12
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
111199416
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111199416
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
111199416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
Tmpp129
zf-C3HC4_3
zf-RING_16
zf-Nse
zf-HC5HC2H
zf-RING_4
Zn_ribbon_IFT122_C
Prok-RING_1
RINGv
Motif
Other DBs
NCBI-GeneID:
111199416
NCBI-ProteinID:
XP_022545209
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Position
A7:complement(500003..502788)
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AA seq
387 aa
AA seq
DB search
MNPPQAISILFFFFLDYVSAQSPPPPPYTTNDFFKPSLVITTGVFSVVFTLTFVLLVYAK
CFHNDLRSETDEDREIGRLERLWQGLFNQSSRLSSGLNRTAIESLPFFRFSALKGSKQGL
ECSVCLSKFEDVEILRLLPKCKHAFHIECIDEWLEQHATCPLCRNRVCIEDELSVFSVLG
CSSNSMRIMNQLTETREEDSNMEIYIEREEGEDSSRFSSFRKILKFGNNDKPLSLVEQGN
EKRLHKFRHRIVVSDVVFRNRWSNVTPSDLTRLTSDMLNSMSSDRFSSMERVDLRDKEEM
DMKRMMKNKESTRRVVSEITAVPRLSVLEVTTAVGGNDGGFAASTSRSDAIAATEERRRQ
LWLPIARRTAHWFANREKMNELNTTKP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaccacaagcaatctccattctcttcttcttcttcttagattatgtctctgct
caatctcctcctcctcctccgtacacaaccaacgacttcttcaaaccgagcttagtcata
accaccggagttttctccgtcgtcttcacactcaccttcgttctcctcgtctacgccaag
tgcttccacaacgacctccgatcagagaccgacgaggaccgagagataggaaggctcgag
cgtctatggcaaggactcttcaatcaatcatctcgattatcatcagggctcaacagaaca
gcaatcgagtctcttcccttcttcagattctctgctttgaaaggatcgaaacaagggctt
gagtgttctgtctgtttgtctaaattcgaagacgttgagattcttaggcttttgcctaag
tgcaaacacgcttttcatatagagtgtattgatgagtggcttgagcagcacgctacgtgc
cctttgtgtagaaacagagtttgcattgaagacgagctctctgttttctctgttttgggt
tgtagtagcaatagtatgagaatcatgaatcagttaacggaaacaagagaagaagactcg
aacatggagatttacatcgaacgcgaagaaggagaagactcttcgagattcagcagcttc
aggaagattctcaagtttggtaataatgataaaccgttgtcgcttgtggaacaaggcaac
gagaaacgtttgcataagttcagacacaggattgttgtttcggatgttgtgtttaggaac
cgttggagtaatgtgactccatctgatttgactcgtttgacatcagacatgttgaattca
atgtcaagcgatagattctcgtcgatggagagagttgacttgcgggacaaggaagagatg
gatatgaagagaatgatgaagaacaaagagtcaacgagaagggtggtttctgagatcacg
gctgttcctagacttagtgtcctggaagttacaacagcggttggaggaaacgacggcggt
ttcgccgcttccacctcgaggagcgatgcgattgctgctacggaggaaagaagacgacaa
ttatggttgccgatagctaggagaacggctcattggttcgctaacagagagaaaatgaat
gaactaaacacgacaaaaccttaa
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