Brassica napus (rape): 111199881
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Entry
111199881 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111199881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
111199881
03036 Chromosome and associated proteins [BR:
bna03036
]
111199881
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111199881
Coactivators
SAGA/TFTC/STAGA complex
111199881
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111199881
STAGA complex
111199881
TFTC complex
111199881
SAGA complex
111199881
SLIK complex
111199881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
MMS19_C
Motif
Other DBs
NCBI-GeneID:
111199881
NCBI-ProteinID:
XP_022546213
LinkDB
All DBs
Position
A8:22749794..22753983
Genome browser
AA seq
544 aa
AA seq
DB search
MGIVPKETIEVTAQSIGITNLSPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASD
VDGALNLRSLEPSYGFASGGPFRFRKAIGHQDLFYTDDREVDFKDVIESPLPKAPLDAGV
VCHWLAIEGVQPAIPENATLEVIRAPADNKIYEHKDGPLIDVRLPVKHVLSRELQLYFQK
IAELTVSKSSPALFKKALVSLASDSGLHPLVPYFTNFIADEVSRGLNDFLLLFNLMHVVR
SLLQNPHIHIEPYLHQLMPSIVTCLVSRKLGNRFADNHWELRDFTANLVSLICKRFGNTY
ITLQSRLTKTLVNAFLDPKKALTQHYGAIQGLSALGHTVVRLLILSNLEPYLSLLEPELD
AEKQKNQMKSYEAWRVYGALLRAAGLCIHDRLKVFPNLPSPSPSFLHKGKGKIINAEPRK
RKLSADSSENQPPHKRLITTDGPDVLRPHDHTGPAPMHVDKPIGNYNLPQNSAQPSSSEQ
ASDGESRNGKEKERGKSRAITMKAILGQIWKDDLDSGRLLVKLQQLYGDRILPFIPSTEM
SVFL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgtacctaaggaaacgattgaggttacagcacagagtattgggatcaccaat
ttgtcacctgaggctgcactcatgcttgctcctgatgttgagtatcgtgttcgtgagatc
atgcaggaagctatcaagtgcatgcgtcactcaaagagaacgactttaacagcttcggat
gtagatggtgctcttaacttaaggagccttgagccgtcatatggctttgcctcaggagga
ccatttcgttttagaaaagctattgggcatcaggatttgttctacactgatgacagagag
gtggatttcaaagatgtgattgagtccccactaccgaaagctccccttgatgctggagtt
gtctgtcactggctggctattgaaggagtgcagccagctatcccagaaaatgctacttta
gaagtcatcagagcacctgcagataacaaaatatatgaacacaaggatggacctcttata
gacgttaggctaccagtgaagcatgtactatctagagaacttcagttatacttccaaaag
attgctgaacttacagtgagcaagtcaagtcctgctctgtttaaaaaagcattagtgagc
ttggcttcagactcaggacttcatcctctagttccatattttacaaatttcattgctgat
gaggtatcacggggtttaaatgacttcctactcctgtttaatctaatgcacgttgttaga
agtcttctacagaatcctcatatacacatagaaccttatctgcaccagttgatgccatct
attgtaacatgccttgtatcgagaaagcttggcaatagatttgccgataaccactgggag
cttcgagattttacagcgaatctagtttcactgatatgtaaaaggtttggaaacacttac
attacccttcagtctcgtcttacgaaaactttagtcaatgcatttttggacccaaagaaa
gctttgacgcagcactatggggcaattcaaggattatcagctttggggcacactgttgta
cgccttcttattctgtcaaatctcgaaccgtatctaagtcttctcgaaccagaactggat
gctgagaagcaaaagaaccaaatgaagagctatgaagcctggcgtgtgtatggggccttg
ctgcgtgctgcaggcctgtgcatacatgataggctaaaagtcttcccaaatttaccatcc
ccttcaccaagtttcctccataagggaaagggaaaaataatcaatgctgagccacgtaag
cggaagctgagtgctgattcttcagaaaaccagccaccccataaaagattgataactaca
gatggtccagatgtgttacgaccacatgatcacaccggtccagctccaatgcatgtagat
aaaccgataggaaattacaatctgccacaaaactctgctcaaccatcctcatcagaacaa
gcttctgatggtgaaagcagaaacggaaaggagaaagaaagaggcaagagccgggctatt
accatgaaagcaatccttggtcagatttggaaagacgatcttgattctggacggctcttg
gtgaaactgcaacagctctatggtgataggattcttccttttatcccttctacagagatg
tcagtattcctctaa
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