Brassica napus (rape): 111199923
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Entry
111199923 CDS
T04128
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111199923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
111199923
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111199923
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
111199923
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
111199923
NCBI-ProteinID:
XP_048636011
LinkDB
All DBs
Position
A1:2720178..2723863
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AA seq
896 aa
AA seq
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MDVFTAENEDGGYDRALPAEESDKDDDDDDGGDLCRICRSPEGPNDPLRYPCACRGSIKY
VHQECLRLWLNRRGFKQCEVCRRSYSFVPVYSENAPERLPWHEFVRGLSLRALRVAAYVF
VFLFNAFCFSLHPWGRSTAIENQRVFRVSEKFALLLAGFLYNGWIAYIMTMMAVLKLAAE
DISWLVHREIHGENEQGRVGGGGGGGVACAFWKSVGILCDWWHDCLTRRGFFHAVLVEPR
EAVIRLRNPQLREFGAVRRFLFLLDDNAFAVLAISFYVSFFFVLLPFMMGRLVILLFQRM
GVATQLLSGDDSLPQELVVIGYWTMLSLSLAYLGSFSTLSRAIAKNLSLGFLVVAVALLY
LLWILSAKVWKNLYVVKLKEGFVLSLKFGVLPLVLGCWLDFCTLPILGITVSRRLEFVSD
YPFVMIVHWVYGELYLLLVSNSMELIQKILQKRPFWFLLDVTDPNYKITKLYLGQLLFAL
AFHASLMVILVHLPIMTISFISPSFFPLHLWFYEERIMFLSMAAYLWLGRIRVIDWLVDL
IQPAIEPIVHKWIIIVSSWLQLRDFFLGNHANQNVRPLLQQGLEIADEWSQVLSIAEGSL
VSFYGSQHDTTSEDDTDDDRFIKLRIGLMLVLATVSLFLISTISMALPILVGRTFFHSIS
FILDKFGLKHDDLYGFWIGCYILRVTYIGACFIINHIMIRRTDLLLNLVLLWIRNALLFS
VWVSFIPMLLGLLIDLMIIIPTQVPLSETPVYSFLRDWLIGLVVLHIWTYLTMFTRVNCF
ATVACREKLKRIRSVGINRLPWKWLLGKVICPIIKTLLITLVFPFVVANSLLPLLQFSGA
VDLAVQRLIWPVLLAIIIIGFIAKLTLDLFHYIHRLEYNDRYMVGDRVADFIEDHS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttttacggcggagaacgaagacggtggctacgatcgagctctcccggcagaa
gaaagtgacaaagacgacgacgacgacgacggaggagatttgtgccggatttgccgatca
ccggaaggaccaaacgatccgttgaggtatccctgcgcgtgtagaggatccatcaagtac
gttcaccaggagtgtctccgtctctggctcaaccgccgcggattcaagcagtgcgaggta
tgtaggcgtagctactcgttcgtacctgtttactctgagaacgcaccggagaggctccca
tggcatgagtttgtcagaggactgtcgctgagggcactacgcgtcgctgcttacgtcttc
gtgtttctcttcaacgccttttgcttttctttgcatccatggggacgaagtactgcgatt
gagaaccagagagttttcagagtttctgagaaattcgctttgctcttggctggcttcttg
tacaacggttggattgcctatattatgaccatgatggcggttctaaagcttgcggctgaa
gatatctcatggttggttcaccgtgagatccatggagagaacgaacaaggacgtgttgga
ggaggaggaggaggaggagttgcgtgtgcgttttggaaatctgtggggattctttgtgat
tggtggcatgattgtctcacacgccgtggattcttccacgccgttttggttgaacctcgt
gaagcagtgattcgtcttcgaaacccacagcttcgtgaatttggagcagtgaggaggttt
cttttccttcttgatgacaatgcatttgctgttcttgccatcagcttttatgtctcattc
ttcttcgttcttcttccatttatgatggggagacttgtcatccttcttttccaacgtatg
ggggtagctacgcagcttctttcaggagacgactcacttccacaagaactagtcgttatt
gggtattggactatgctgtcactttccttggcttatcttggaagtttttcaactttgagt
cgagccatagcaaagaacttatcactgggatttctcgtggtagcagtggcactcctatac
ctcttatggattctttcagccaaagtgtggaaaaatctgtatgtggttaaacttaaagag
ggtttcgtcttgagtttgaagtttggagtgttgcctttggtgcttggctgctggttagat
ttttgcacactccctatacttggaattacagtttcccggaggcttgagttcgtttcagac
tatcccttcgtgatgatagtacattgggtgtacggagaactttacttgctattagtttcc
aattcaatggagcttatccagaagattttgcagaaacgacccttttggtttctactagat
gttactgatcccaactacaagatcactaaactgtaccttggccaacttctctttgcgttg
gctttccatgcatcattgatggtgattttggttcacttgccaataatgactatctctttc
atcagcccctcttttttcccgctccatttatggttctatgaagaaaggattatgtttctc
tcaatggctgcttatttatggttagggagaataagagtaatcgattggttagtcgatctt
attcaaccagctatagaacccatagttcacaagtggattatcattgtcagttcctggctt
cagttgagggacttctttctcggaaaccatgcaaaccagaatgtgagaccattgttgcaa
caagggctggagattgctgatgaatggtctcaagtgctttccatagctgaaggatctcta
gtcagcttctatggttctcagcatgataccacttctgaagacgatactgacgacgatagg
tttataaaactgaggattggattgatgttggttctagctactgtgagcctgtttctcatt
agtacaatttccatggcgttgcctattctggtgggaaggacttttttccactctatctct
ttcatcctggataagttcggactcaaacacgacgatctttatgggttctggattggatgc
tatatcctgcgagtaacctatatcggggcatgcttcataattaaccatatcatgattaga
agaaccgatttgcttctcaaccttgttctgctgtggatacggaatgccttactgttctca
gtctgggtctccttcataccaatgttacttggtcttcttatcgatcttatgatcatcatc
ccaacacaagtgcccctaagcgaaaccccggtttattcatttctccgagattggttgatc
ggactagttgtcctccacatctggacctatctaacaatgttcacgcgtgtcaactgtttc
gcaactgtggcgtgtcgggagaagctcaagagaatcaggagtgtaggaatcaacaggctt
ccatggaagtggctgcttggaaaagtcatttgtccgatcataaagactcttctaatcact
cttgtgttccctttcgtggtggccaactctctattgccattgcttcagttttctggtgca
gtcgacctagccgtgcagaggctcatatggccggtgttattagccatcatcatcataggg
ttcatagccaagctcaccctcgatctgttccattacattcatcgtctggaatacaatgat
cggtatatggtgggagacagagtggctgacttcattgaagatcattcatga
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