Brassica napus (rape): 111200360
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Entry
111200360 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4 isoform X1
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
111200360
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111200360
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
111200360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_1
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111200360
NCBI-ProteinID:
XP_022546952
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All DBs
Position
A9:complement(37001327..37003367)
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AA seq
326 aa
AA seq
DB search
MDSHINPSHGGNSSSLDSLKPSVLATIIILLITLLVSVSICVLLRCLNRCNHHHSPLSPS
PSDSLRFSTHRVSPETERSSSVLDSLPIFKFSSVTRRSSTSSNSSDCAVCLSKFEPEDQL
RLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASDSDLTKALGGGEGDNSFRLEIGSIS
RRNDGPIPDSDDQHRSYAMGSFEYIVDDVESEISESNFNQTRKQEDAPVEVTASSYNPSA
FEASLAGEIGNEGSRSWLKDYVDRLSLGISFRSSDRFFTGSSRRSEEMTVVDLEANHAGE
EISELFRWFSETLTQHIAKRSLLLSV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggactctcacatcaaccctagccatggcggaaactcttcttctctcgacagtctcaaa
ccaagcgtactagccaccatcatcatccttctcatcactctcctcgtctccgtctccatt
tgcgtcctcctccgctgcctcaaccgctgtaaccaccaccactcgcctctctctccgtct
ccctccgattccctccgattctccactcaccgagtctctcccgaaacagaacgatcctcc
tctgtgctcgactcgctcccgattttcaaattctcctccgtcactcgccgatcttccacc
tcctctaactccagcgactgcgcggtttgtttatcgaagttcgaaccggaggatcagctt
cgtcttctgcctctctgttgccacgcgtttcacgcggattgtatcgatatctggctcgtg
tctaatcaaacgtgtccgctttgtcgctctcctctgttcgcttccgattccgatctgacg
aaggctctcggcggcggagaaggagataacagtttccgtctcgaaatcggatcaatcagc
cgccgcaacgacggtccgattccggattccgacgatcagcaccggtcttacgcaatggga
tcgttcgagtacatagtcgacgacgtcgaatccgaaatctcggagtctaatttcaatcaa
acgcgaaaacaggaagacgcgcctgtggaggttactgcgtctagttataatccgtccgcg
tttgaagcgagtttggcgggagagataggtaacgaaggttctagaagctggcttaaggat
tacgtggacagactctcgcttggtatttcgtttagaagctctgataggttttttactggg
agcagtcgtcggagcgaggaaatgacggtggtggatttggaggcgaatcatgccggagaa
gagataagtgagcttttccggtggttctcagaaacgctaacgcaacatattgctaaaagg
tctcttctcttgtccgtctag
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integrated database retrieval system
