Brassica napus (rape): 111200441
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Entry
111200441 CDS
T04128
Name
(RefSeq) syntaxin-42-like isoform X1
KO
K08489
syntaxin 16
Organism
bna
Brassica napus (rape)
Pathway
bna04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111200441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
111200441
Membrane trafficking [BR:
bna04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
111200441
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GFIT
Motif
Pfam:
SNARE
Syntaxin
Prominin
FlxA
COG5_N
Motif
Other DBs
NCBI-GeneID:
111200441
NCBI-ProteinID:
XP_048595074
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Position
A9:282346..284597
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AA seq
323 aa
AA seq
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MATRNRTTVYRKHRDACKSARAPLSDSFGGPVIEMVSGSFARSNHSSYAPLSTNDPGPSS
SNDDAFTIGLPPAWVDDSEEITFNIQKVRDKMGELAKAHSKALMPTFGDNKGDQRVVEMI
THEITDLLRKSEKRLHNLSSRGGGPSEESNLRKNVQRSLATDLQSLSMELRRKQSTYLKR
LQQQKEGQDGVDLEFNMNGKMSRMDEDEELGGMGFDEHQTVTLKEGQHVSAEREREIQQV
LGSVNDLAQIMKDLSALVIDQGTIVDRIDYNIQNVSTSVGEGYKQLQKAERTQREGAMVK
CAMILLILCFIMIVLLILKNVLF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaaccgaacgacggtgtacagaaaacatagagatgcgtgtaagagcgcg
cgagctcctttatccgattcgttcggtggtccggtgatcgaaatggttagcggctctttt
gctcggtccaaccactcctcttatgctcctttgagcaccaatgatcctggtccctcaagt
agcaatgatgatgcgttcacaattggtctgccaccagcttgggtggacgactctgaggag
atcacttttaatatacagaaggtgagagacaagatgggtgagctagcaaaggctcattca
aaggctctaatgcctacgtttggagataacaaaggggatcagcgtgtagtggagatgatc
actcatgaaatcacggatctgttgaggaagtcagagaagaggttacacaatttatctagt
agaggaggagggccttcagaagaatctaatctcaggaaaaatgtgcagcgttctcttgca
acagatcttcagagcctctccatggagctccgcagaaaacagtctacttatttgaaacgt
ctccagcagcagaaagagggtcaggatggagtagatttggagtttaacatgaatggaaag
atgtcaagaatggatgaagacgaagaacttggtggcatgggttttgatgaacaccagaca
gtcacgttgaaggaagggcaacatgtctcagcggaaagggaaagagaaatacagcaggtg
ttggggtcagtgaatgatcttgcacagataatgaaagacttatcagctcttgtgattgat
cagggcacaatagttgatcggatagactacaatatccaaaatgtttctacatctgtcggg
gaaggctataagcaactacagaaggcggagagaacacaaagagaaggagcaatggtgaaa
tgtgcgatgatactccttatactttgcttcataatgattgtccttttaattctcaagaat
gtattgttttag
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