Brassica napus (rape): 111201467
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Entry
111201467 CDS
T04128
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
bna
Brassica napus (rape)
Pathway
bna03420
Nucleotide excision repair
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111201467
09124 Replication and repair
03420 Nucleotide excision repair
111201467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bna03051
]
111201467
03400 DNA repair and recombination proteins [BR:
bna03400
]
111201467
Proteasome [BR:
bna03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111201467
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111201467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
XPC-binding
UBA_7
Rad60-SLD
Ubiquitin_2
Dsc3_N
UBA_RAD5A
Ubiquitin_4
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
111201467
NCBI-ProteinID:
XP_022549226
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Position
A10:15305721..15308222
Genome browser
AA seq
355 aa
AA seq
DB search
MKIFVKTLKGDRFEIEVNLEDSVVDVKKNIETVMGVTAEEQMLIHKGKVLKDETTLEASN
VSEKSIIGVIKRKAASTATSTSTETPTEGASAGASYVASERVSESSIQKILGMVGEGWDR
YMVTSALCLADDDVNKALEYLYFELPRQIEDHYIAEGAQDQTQEYENPTEEDELRFFDYL
NGSPEQEYLRALARSDPGIVKDFVEMLEEQDPPIFVLIQDNKALFLRSLLEVQGGACGNE
MEQPHEHQAVQTSEPNNGEDGDNQVGGESEETKVEELQADQTNKPNNGVDGGNQVVGESE
ETKVEVANPEDNELIEQLEALGFERGDAEVAYFACNKNVQEAANNLLGHKHESQE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctttgtcaaaacgctgaagggggatcgcttcgagatcgaagtcaacctcgag
gattcggttgttgatgtgaagaagaacatagagacggtgatgggagttaccgctgaagaa
caaatgcttattcacaaagggaaagtgcttaaagatgaaacaacattagaggctagcaac
gtttccgagaaaagcattattggcgttataaagagaaaagctgcatctaccgcaacgtct
acctcaactgagactcctactgaaggtgcctcggctggtgcatcatatgtggccagtgaa
agagtttcagagagtagcattcagaagattcttgggatggtcggagaaggctgggatcgt
tacatggttacctctgcactctgtttggcagatgatgacgttaataaagccttggaatat
ctttactttgagctcccgaggcagattgaagatcattacatagctgagggcgcacaggat
caaactcaagaatatgaaaatcctacagaagaagacgagctacggttttttgattacctc
aacggcagtccagagcaagagtatctacgagctttggcgcgatcagaccctggtatcgta
aaggactttgtagagatgctagaggagcaagatccgccaatttttgtgttgattcaagac
aacaaagctctcttcttacgctcactacttgaagttcaaggaggagcatgtggcaacgaa
atggagcagcctcatgaacaccaagcagtccagaccagcgaaccaaacaatggagaagat
ggtgacaaccaagtgggaggagagtctgaggaaaccaaagttgaggaactccaagcagac
caaacaaacaaaccaaacaacggagtagatggtggcaaccaagtggtgggagagtctgag
gaaaccaaagttgaagtcgccaaccctgaggataatgaattgatcgaacagctggaagca
ctgggatttgagagaggtgatgcagaggtggcgtacttcgcctgcaacaagaacgtacaa
gaggctgcgaacaatcttctcggtcacaagcacgagtctcaagaataa
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