Brassica napus (rape): 111201510
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Entry
111201510 CDS
T04128
Name
(RefSeq) THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111201510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111201510
03041 Spliceosome [BR:
bna03041
]
111201510
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111201510
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111201510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF7557
Motif
Other DBs
NCBI-GeneID:
111201510
NCBI-ProteinID:
XP_022549351
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Position
A10:complement(4113355..4115166)
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AA seq
455 aa
AA seq
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MGIFLESRGHMELISMSDGSMQREMSKDAMAPLELLRESKSSIEEIISRMLSIKNQGLPK
SENRELLTQMFLNFINLRQANRAILMEEERVRRERESSKSPMDLTSLQLHNLTYEKSHYL
KATRSSREFKSKYPNIDLISEQDFFRDAPEAIKSQTLSNDASHDLMLKRLNFELHQRKEV
CKLRAELEQRKNCLLEANSERAKFLSSLPLHLKSLKKASLPVQNQLSLPNPKKLKYHDLA
ELLPPPLYVVYSKFMAQKEAFEEKIDIEVSGSLKDAQSYARQQAELNQESSDDDGKRQRK
RLKKESSDEAGLYRVHPLKLVLHIYADETPDPKSHKLVMLKFEYLLKLNVVCVGIEESQD
GPERNILCNLFPDDAGLEPPHQSTKLILGDDHAFDESRTSRPYKWAQHLAGIEVLPEMSL
FVTGKNNTQNSDTASVSDHYSVQTVLRRIRAQKKG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggggatttttttggagagtagagggcatatggagttaatctccatgtcggacggaagt
atgcaaagggagatgtcgaaagacgcgatggctccgctagagctactccgagaaagcaaa
tcctccatcgaagaaatcatctcgaggatgctctccatcaagaatcagggactccccaaa
tctgagaaccgcgaactcctcactcagatgtttctcaacttcatcaacctccgccaggcg
aatcgtgcgattctgatggaagaagagagagtgagaagagagagagagtcatcaaagtct
ccaatggatctcacttcattgcagcttcacaatctcacgtacgagaagagccattacctc
aaagccaccagatcttccagagagttcaaatccaagtaccccaacatcgatctcatatcc
gaacaagacttcttcagagacgctcccgaagctatcaaatctcagacgctctcaaacgat
gcttcccatgatttgatgcttaaaagactcaactttgagctccatcagaggaaagaggta
tgcaagcttcgagctgagttggaacaacgtaagaactgtttgctggaagctaactccgag
cgtgccaagtttctctcaagtctcccactgcatctcaagtctctgaagaaagcatctttg
cctgtacagaaccagttgagtttgccgaatccgaagaagctcaagtatcatgatctagct
gagcttcttcctccgccgctttacgtcgtgtattcaaagttcatggcccagaaggaagct
tttgaagagaagatagacatcgaggtatctgggagtcttaaggatgctcagagttatgct
cgccagcaagcggaactgaaccaagagagctctgatgatgatgggaaaaggcaaaggaag
cgacttaagaaagagagttctgatgaggcaggactgtatcgagtccatcctcttaaactt
gtccttcacatttatgctgatgagactccagatccgaaatcacataagcttgttatgctc
aagtttgagtacttgttgaagttgaatgttgtatgcgtcggcattgaagaatctcaggat
ggaccagagagaaatatcctgtgcaacttgtttccagacgatgctggacttgagcctcct
caccagtcaaccaagctcattcttggtgatgatcatgcatttgatgagagccgaacatcg
aggccatataagtgggcacaacatttggcggggatcgaggttttacctgaaatgtcactg
tttgtaactggcaagaataatactcaaaacagtgatacagcttctgtatctgatcactac
agtgtgcagactgttctgagaagaatacgggcccagaaaaaaggctaa
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