Brassica napus (rape): 111202023
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Entry
111202023 CDS
T04128
Name
(RefSeq) transcription factor SPATULA
KO
K28361
transcription factor SPT/ALC
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111202023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
111202023
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111202023
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
111202023
NCBI-ProteinID:
XP_022550134
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Position
C1:1042432..1044536
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AA seq
346 aa
AA seq
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MGDNKKLISSSSSSTNTSIYDTRGNNSNNHHHHHPPSSSDEISQFLRHIFDRSSPLPSYY
SPAMTTTTSTAAIGVQGDPHADNPRSFVSTTPASKRAVDFSDVLIGSAAAAAGCYGFPGG
GNNIAQGSSSGTRVSSSSIGASGNETDEYDCESEEGVEAVVDDELPSKSRNSSKRCRAAE
VHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLN
LHPLCLPGTSLHPLQLSQIRPPETSNDPLLNHSNQYASTSNAPDMINMPSAYTMEPSIRS
HFGPFPHFTPPVEMSREGGLTHQRLNTSGEHAAFDGQHPEIKDRLT
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggagataataagaaactgatttcatcttcttcttcttcaactaatacctcgatttac
gacactcgtggtaataatagtaacaatcatcatcatcatcatcctccgtcatcttccgac
gagatttctcagtttctccggcatattttcgaccgttcttctcctttaccttcttactac
tctccggccatgaccacgacgacttccacggcggcgataggtgttcagggagacccgcat
gcagacaacccgagaagcttcgtttctactacaccggcgtcgaagcgcgccgttgatttc
tccgacgttttgatcggctccgccgccgccgccgccgggtgttatggtttccccggcggt
ggtaacaacattgctcaagggagcagctcggggactcgtgtttcgtcttcttccattgga
gctagcgggaacgagaccgacgagtatgactgcgaaagcgaggaaggagtagaagctgtg
gttgatgatgagcttccctcgaagtctcgtaactcatctaagaggtgcagagctgctgaa
gttcataatttgtctgaaaagaggagaagaagtagaatcaatgaaaaaatgaaagcttta
caaagtctcatccctaattcaaataagacggataaggcttcgatgcttgatgaagccata
gagtatctgaaacagcttcagctccaagttcagatgttgacaatgaggaatgggctaaac
ttgcatcctttatgcttacctggaacttcattacacccactgcaactctcacagatccga
cctccagaaacaagcaatgatcctctgcttaaccactccaaccaatatgcttcgacttct
aatgcaccggatatgatcaacatgccttccgcgtacacaatggaaccttccatccgcagt
cactttggaccttttccccacttcactccacctgtggagatgagtcgagaaggcgggtta
actcatcagaggttgaacactagtggagaacatgctgcgtttgatggacaacatcctgag
ataaaagatcgacttacttga
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