Brassica napus (rape): 111202039
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Entry
111202039 CDS
T04128
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111202039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
111202039
03036 Chromosome and associated proteins [BR:
bna03036
]
111202039
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111202039
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111202039
PBAF complex
111202039
GBAF(ncBAF) complex
111202039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
111202039
NCBI-ProteinID:
XP_022550190
LinkDB
All DBs
Position
C1:complement(2324028..2327939)
Genome browser
AA seq
928 aa
AA seq
DB search
MEERRRDTGGTLASAGSSGDSPASEPTPRRRVKRKSNALGASNSSSTSSKRMLTREKAML
ASFSPVHNGPLTRARQAPSNMPSAAEAKPELLLNAADGEKPKEEEERNKAIREWEALEAK
IEADFEGVRSRGSNVHVVPNHCGWFSWGKIHPLEERSLPSFFNGKLEGRSSDVYIEIRDW
IMRKFHSNPNTQLEGKDLTELEVGDVEAKQEVMEFLDYWGLINFHPFPPPDASSSGGERV
GVGDKESLLNSLYRFQADEASSMAAAFVQKPRLAAQATTPSGMFPDPMAAAADDWLKQEG
PAVEYHCNSCSADCSLKRYHCPKQADFDLCTECFDSGKFSSDMSSSDFILLEPAKDPGVG
SGKWTDQETLLLLEGLEIFKENWSEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDNKDP
SSKDTTDIAVSKDEKPVQKEAPVEKENTNHVVEVEAVKEAPEKEDDNEGKVPQESSSKPG
DASEETKEVEADQKTPKVETVIAERCKDEADENIALKALTEAFEDVGYPITPEASLSFAD
LGNPVMGLAAFLVRLAGADVATASARASVKSLNSNSGLLLATRHCFVLDDPPENKTDLTE
SKSVDAEDVSLISDDREMTDTDPGKENQDSVSEEKQPGSRTEISARNPDSKGPKVYSNAA
AAKSSEKPPDIICKLQDKSSGKELKDPLKDGNKLSSEKKAASKATVSKAAADASQPEASK
DVEMKDTLQSEKDPQDMVKTAGEKVEQAKEDVHSMPDTSVAEQPIGSAFLPENGTGEKLN
KEGSKEKNVCAVTKDKHNSDKLKRAAISALSAAAVKAKHLAKLEEDQIRQLSGSLIEKQL
HKLEAKLSIFNDAESLTARVREQLERSRQRLYHERAQIIASRLGVPPSVSSKASLPANRI
ATNFANVAHRPPMGMAFPRPPMPRPPGP
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagacgacgcgatactggaggaaccctagcttcggccggcagctccggagac
tctccggcatctgagccgacgccgcggcggcgcgtgaaaagaaaatcgaacgctctcgga
gcctccaactcctcatcaacatcctccaagcggatgctgacgcgcgagaaggcgatgctc
gcgtccttctctccggtccacaacggacctctaaccagagctcgacaggcgccgagcaac
atgccgtccgcggccgaggcgaagcctgagctgctcttgaatgccgcggacggcgagaag
ccgaaggaggaggaggagaggaacaaggcgatccgcgagtgggaggccttggaggctaag
atcgaagctgatttcgaaggggttagatctcgcggaagcaatgttcatgtggtgcctaat
cattgcggttggttctcatggggaaagattcatccgcttgaagagcgttcgttaccttct
ttcttcaacggcaagttagaaggtcgcagttctgatgtttacattgaaattagggattgg
atcatgaggaagtttcattccaatccaaacacgcaattagaaggaaaagatttaacagaa
ctcgaggttggagacgttgaagcaaagcaggaggtgatggagttcttggactactggggg
ttaatcaattttcacccgttcccaccgccagacgcgagttctagtggtggtgagcgtgtt
ggtgttggggataaggagtctttgctcaacagtttatatcgattccaagcggatgaggct
tcttcgatggcggctgcttttgttcagaagcctcgtctcgcagcgcaagctactacaccg
tcggggatgttcccggatccgatggctgctgctgctgatgactggctgaagcaagagggt
ccagcggttgaatatcactgcaactcttgttcggctgattgctctctcaaacgctaccac
tgcccgaaacaggcagattttgacttgtgcacggaatgctttgacagtggcaagttcagc
tcagatatgtcatcttccgactttatactcttggagcctgctaaggatcctggcgttggt
agtgggaagtggactgatcaagagactcttcttctactggaaggtttagagatcttcaag
gagaattggagtgagattgcggagcatgttgctacgaaaacgaaagctcagtgtatgctt
cattttcttcaaatgccaatcgaggatgcgtttcttgatcaaattgacaacaaagatcca
agttcaaaagacactacggatatagctgtgtccaaagatgagaaacctgttcaaaaagag
gcacctgtagagaaagagaatacgaatcatgttgttgaagttgaagctgtgaaggaagct
ccagaaaaagaagatgacaatgaaggaaaagttcctcaggaatcttcttcaaagcctggg
gatgcgagtgaggaaactaaggaagtggaagccgaccagaaaacgcccaaggtagaaact
gtcattgctgaaagatgtaaagatgaggctgatgaaaacattgctctgaaagctctgacc
gaagcttttgaagacgttggttatcccatcacacccgaagcctctttatcttttgctgat
ttgggaaatcctgtcatgggactggcagcttttctggtgagattggcgggagctgacgtt
gctactgcttcagcccgagcttctgtaaaatctcttaacagcaattctgggttgttgctt
gccacaagacattgttttgttctcgatgatccaccagaaaacaagactgacttaactgaa
tcaaaaagtgtggatgcagaagatgtctccttgatttcagatgatagggaaatgacagat
actgatccaggcaaagaaaatcaggattcagtctctgaagaaaagcaacctggttcccga
actgaaatttctgctagaaatccagattccaaaggaccaaaagtatatagcaatgcagcc
gcagctaaaagttcagagaaaccaccggatattatttgtaaattgcaggacaaaagttca
gggaaggagctcaaagatcctttaaaggatggtaataagctttctagcgaaaagaaagcg
gcctctaaagcaactgtctccaaggcagctgcagatgcttctcagccagaagcatccaaa
gatgtggagatgaaggatacattacagtccgagaaggatcctcaagatatggtgaaaaca
gcaggagaaaaggttgaacaggctaaggaggatgttcatagtatgccagacacgtctgtt
gcagagcagcccatcggatcagcttttctaccggaaaatggaacaggtgaaaaactaaat
aaagaaggaagtaaagagaagaatgtttgtgcggtgacaaaagacaaacataactctgat
aagcttaagcgcgcagctatctctgctctctcagctgcggcagtaaaggcaaagcatctt
gcgaagcttgaagaagatcaaatccgacaactttctggatcattaatagagaagcagtta
cataaactagaagcaaagctatctatcttcaacgacgctgaaagcttgacagcgagggta
agagagcagttagaaaggtcaaggcaacggctataccatgaaagagcacagatcatagcg
tctcgactgggtgtcccgccttcagtgtcctcaaaagcatcattaccagcaaacagaatc
gctacaaattttgctaatgtggctcatagacctccgatggggatggcctttccacgccca
ccaatgccaagacctccaggtccatga
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