KEGG   Brassica napus (rape): 111202039
Entry
111202039         CDS       T04128                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3D
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111202039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    111202039
   03036 Chromosome and associated proteins [BR:bna03036]
    111202039
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     111202039
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    111202039
   PBAF complex
    111202039
   GBAF(ncBAF) complex
    111202039
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding ZZ Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 111202039
NCBI-ProteinID: XP_022550190
LinkDB
Position
C1:complement(2324028..2327939)
AA seq 928 aa
MEERRRDTGGTLASAGSSGDSPASEPTPRRRVKRKSNALGASNSSSTSSKRMLTREKAML
ASFSPVHNGPLTRARQAPSNMPSAAEAKPELLLNAADGEKPKEEEERNKAIREWEALEAK
IEADFEGVRSRGSNVHVVPNHCGWFSWGKIHPLEERSLPSFFNGKLEGRSSDVYIEIRDW
IMRKFHSNPNTQLEGKDLTELEVGDVEAKQEVMEFLDYWGLINFHPFPPPDASSSGGERV
GVGDKESLLNSLYRFQADEASSMAAAFVQKPRLAAQATTPSGMFPDPMAAAADDWLKQEG
PAVEYHCNSCSADCSLKRYHCPKQADFDLCTECFDSGKFSSDMSSSDFILLEPAKDPGVG
SGKWTDQETLLLLEGLEIFKENWSEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDNKDP
SSKDTTDIAVSKDEKPVQKEAPVEKENTNHVVEVEAVKEAPEKEDDNEGKVPQESSSKPG
DASEETKEVEADQKTPKVETVIAERCKDEADENIALKALTEAFEDVGYPITPEASLSFAD
LGNPVMGLAAFLVRLAGADVATASARASVKSLNSNSGLLLATRHCFVLDDPPENKTDLTE
SKSVDAEDVSLISDDREMTDTDPGKENQDSVSEEKQPGSRTEISARNPDSKGPKVYSNAA
AAKSSEKPPDIICKLQDKSSGKELKDPLKDGNKLSSEKKAASKATVSKAAADASQPEASK
DVEMKDTLQSEKDPQDMVKTAGEKVEQAKEDVHSMPDTSVAEQPIGSAFLPENGTGEKLN
KEGSKEKNVCAVTKDKHNSDKLKRAAISALSAAAVKAKHLAKLEEDQIRQLSGSLIEKQL
HKLEAKLSIFNDAESLTARVREQLERSRQRLYHERAQIIASRLGVPPSVSSKASLPANRI
ATNFANVAHRPPMGMAFPRPPMPRPPGP
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggaggagagacgacgcgatactggaggaaccctagcttcggccggcagctccggagac
tctccggcatctgagccgacgccgcggcggcgcgtgaaaagaaaatcgaacgctctcgga
gcctccaactcctcatcaacatcctccaagcggatgctgacgcgcgagaaggcgatgctc
gcgtccttctctccggtccacaacggacctctaaccagagctcgacaggcgccgagcaac
atgccgtccgcggccgaggcgaagcctgagctgctcttgaatgccgcggacggcgagaag
ccgaaggaggaggaggagaggaacaaggcgatccgcgagtgggaggccttggaggctaag
atcgaagctgatttcgaaggggttagatctcgcggaagcaatgttcatgtggtgcctaat
cattgcggttggttctcatggggaaagattcatccgcttgaagagcgttcgttaccttct
ttcttcaacggcaagttagaaggtcgcagttctgatgtttacattgaaattagggattgg
atcatgaggaagtttcattccaatccaaacacgcaattagaaggaaaagatttaacagaa
ctcgaggttggagacgttgaagcaaagcaggaggtgatggagttcttggactactggggg
ttaatcaattttcacccgttcccaccgccagacgcgagttctagtggtggtgagcgtgtt
ggtgttggggataaggagtctttgctcaacagtttatatcgattccaagcggatgaggct
tcttcgatggcggctgcttttgttcagaagcctcgtctcgcagcgcaagctactacaccg
tcggggatgttcccggatccgatggctgctgctgctgatgactggctgaagcaagagggt
ccagcggttgaatatcactgcaactcttgttcggctgattgctctctcaaacgctaccac
tgcccgaaacaggcagattttgacttgtgcacggaatgctttgacagtggcaagttcagc
tcagatatgtcatcttccgactttatactcttggagcctgctaaggatcctggcgttggt
agtgggaagtggactgatcaagagactcttcttctactggaaggtttagagatcttcaag
gagaattggagtgagattgcggagcatgttgctacgaaaacgaaagctcagtgtatgctt
cattttcttcaaatgccaatcgaggatgcgtttcttgatcaaattgacaacaaagatcca
agttcaaaagacactacggatatagctgtgtccaaagatgagaaacctgttcaaaaagag
gcacctgtagagaaagagaatacgaatcatgttgttgaagttgaagctgtgaaggaagct
ccagaaaaagaagatgacaatgaaggaaaagttcctcaggaatcttcttcaaagcctggg
gatgcgagtgaggaaactaaggaagtggaagccgaccagaaaacgcccaaggtagaaact
gtcattgctgaaagatgtaaagatgaggctgatgaaaacattgctctgaaagctctgacc
gaagcttttgaagacgttggttatcccatcacacccgaagcctctttatcttttgctgat
ttgggaaatcctgtcatgggactggcagcttttctggtgagattggcgggagctgacgtt
gctactgcttcagcccgagcttctgtaaaatctcttaacagcaattctgggttgttgctt
gccacaagacattgttttgttctcgatgatccaccagaaaacaagactgacttaactgaa
tcaaaaagtgtggatgcagaagatgtctccttgatttcagatgatagggaaatgacagat
actgatccaggcaaagaaaatcaggattcagtctctgaagaaaagcaacctggttcccga
actgaaatttctgctagaaatccagattccaaaggaccaaaagtatatagcaatgcagcc
gcagctaaaagttcagagaaaccaccggatattatttgtaaattgcaggacaaaagttca
gggaaggagctcaaagatcctttaaaggatggtaataagctttctagcgaaaagaaagcg
gcctctaaagcaactgtctccaaggcagctgcagatgcttctcagccagaagcatccaaa
gatgtggagatgaaggatacattacagtccgagaaggatcctcaagatatggtgaaaaca
gcaggagaaaaggttgaacaggctaaggaggatgttcatagtatgccagacacgtctgtt
gcagagcagcccatcggatcagcttttctaccggaaaatggaacaggtgaaaaactaaat
aaagaaggaagtaaagagaagaatgtttgtgcggtgacaaaagacaaacataactctgat
aagcttaagcgcgcagctatctctgctctctcagctgcggcagtaaaggcaaagcatctt
gcgaagcttgaagaagatcaaatccgacaactttctggatcattaatagagaagcagtta
cataaactagaagcaaagctatctatcttcaacgacgctgaaagcttgacagcgagggta
agagagcagttagaaaggtcaaggcaacggctataccatgaaagagcacagatcatagcg
tctcgactgggtgtcccgccttcagtgtcctcaaaagcatcattaccagcaaacagaatc
gctacaaattttgctaatgtggctcatagacctccgatggggatggcctttccacgccca
ccaatgccaagacctccaggtccatga

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