Brassica napus (rape): 111202423
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Entry
111202423 CDS
T04128
Name
(RefSeq) exocyst complex component SEC8-like isoform X1
KO
K06111
exocyst complex component 4
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
111202423
Membrane trafficking [BR:
bna04131
]
Exocytosis
Tethering complex
Exocyst complex
111202423
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Vps54_N
EXOC6_Sec15_N
Sec8_C
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
111202423
NCBI-ProteinID:
XP_048609909
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Position
A1:28184940..28193773
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AA seq
1045 aa
AA seq
DB search
MGIFDGLPVPSDKTYLRDELARIDESWAVARFDSLPHVVHILTSKDRETDVLLLKEQSDV
VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKLGDLKHDLADAKRSLGTRNKQLHQ
LWYRSVTLRHIIALLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG
ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDDVPTTTAVAASRMS
SQPLSRRTRTLKGDSQFVVRGLTNGSHRTSSIEEGSSFDGHDEEDSVEHDEATDSKLLSH
QLTPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIICQKLRPTIHE
IIISKIKAHMETRNLSKSACSQGDQTVAAGLHFIKGQPEAYRLSKEKPQNRISNSGTHLA
VSPVSPLMVPGGKAQAAAKDLLDSILDTIVKIFENHVVIGELLELKASQHDINTPKSLPT
NVNWNTDSEASQVTGGYTISYPLTVLQSECQQLICEILRATPEAASADAVAQTAKVAKKA
SKKDKRNAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKKAPNSSQEGYGSAAVLPEQG
IYLAASIYRPVLQFTDKITSMLPKKHSQLVIDGLLTFTENFVKDHLLPTMFVDYRKGVQQ
AISSAAAFRPRAHTTTYTPTVEKGRPILQGLLAIDLLAKEVLGWAQAMPKFSTDLVKYVQ
TFLERTFERCRTSYMEAVLEKLSYRLIGRHDIEKLMRLDPASACLPALLGHSVSHSEAVG
SDVELCELFLSLPSIKQDSLIRDDNKLILLASLSDSLEYVADSIERLGQAVPRAASQSED
NSRNQATSPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREYLEDEDAEEPD
DFVISLTSQITRRDEGMSPFISGEKRNYVFGGICGIAANASIKALADMRSINLFGVQQIC
RNTIALEQAMAAIPYVDGESVQQNLDRVRTYFELLNMPFEALLTFIAEHDQMFTPTEYSN
LLKVNVPGRDTPTDAQSRLSEILSH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggggatcttcgacggtttgcctgttccctcagataaaacttaccttagggatgagctg
gcacgaatagatgagagctgggctgttgcacgcttcgactctttgccacatgtggtccat
atcctcacctcaaaagaccgtgagactgacgttcttttactaaaggaacaaagtgatgtt
gtcgaggaggttgtggatgaagttgtgcatgcttatcacggtggtttcaacaaggccatt
caaaactactcacagatcttgcgattgttcagtgagtccactgaaaaattaggcgacttg
aagcatgatttggcagacgcaaagaggagcttgggtacacgcaataaacagttgcaccag
ctgtggtaccgttctgtaacattgcggcacatcatcgcacttttggatcaaattgagggc
attgctaaggttccatctcgtattgagaagctcattgctgataagcagttttacgctgct
attcaagtgtatcttcagtcgtctctgatgcttgagcgtgaggggcttcaaacggttggt
gctcttcaagatgtcagatctgagctaactaagctgcgcggagcccttttctttaaaatt
ctagacgatttgcatgcacatctatacaacagaggtgaatacagttcagttgcgtcaagc
atatacgaaagagatgatgatgtaccaacaacaacagctgttgcagctagtcgaatgagc
tcacaaccactgtctcgtagaacacggacactgaaaggtgatagtcagtttgttgttaga
gggctcacaaatggttcacatagaacgtcgtctattgaggaaggttcatcatttgatgga
catgatgaggaggactctgtcgaacatgatgaagctactgatagtaaactgctttctcac
caacttacgccatggctttctgattccacgcctgacgagtttattgaagcagtaagaaag
agtgatgatccacttcatgtgaagtatctacagacccttgttcagtgtctctgcatgctt
ggaaaagttgcagctgctggtgctatcatatgccaaaaacttcgacccacaatacatgag
atcattatatccaagattaaagcccatatggagactagaaatttgtcaaagtccgcctgt
agtcagggtgatcaaacggtagctgcgggattgcattttataaaaggacaaccagaggcc
tacagactatcaaaagagaaacctcaaaacaggatatcaaattcaggaactcacctggct
gtgagccctgtttcgcctcttatggttcctggagggaaggcgcaagctgctgcaaaagac
cttcttgactcaattttagatactattgtcaagatatttgaaaatcatgttgttattgga
gagcttttggagttgaaggcttcgcaacatgacattaacacaccgaagtcattgcctacg
aatgtgaactggaataccgattctgaagcatcccaagttactggaggctacactatcagt
tatcccttaacagtcttacagagtgaatgccagcaactcatttgtgagattctacgagca
actccagaagctgcttcagcagatgctgtggcacaaactgctaaagttgcaaagaaggct
tccaaaaaagacaaaaggaatgcacctgaagatgggctaacattcacctttcggtttaca
gatgcaactgtatcgatttctaatcagggagctgatctaattcgccaaggctggggaaag
aaggctccaaattcatcacaggaaggttatggttctgcagcagtattgcctgaacaggga
atatatctagctgcatctatataccgacctgtccttcagtttacagataaaatcacttca
atgttgcccaaaaagcattcccagcttgtgattgatgggttgcttacattcactgagaac
tttgtgaaggaccacctgttacctacaatgtttgtggactataggaaaggcgtacagcaa
gctatatcaagtgccgccgcatttagaccacgtgcacatacaactacttacactccaacc
gtagaaaagggtcgtcctatcttacaaggacttttggcaatagatctccttgcaaaagag
gttcttggttgggctcaagccatgcctaaattttctactgaccttgtgaagtatgttcag
acatttcttgagagaacatttgagagatgtcgaacatcatacatggaggctgtgcttgag
aagctcagttacaggcttattgggaggcatgatattgagaaattgatgcgacttgatccg
gcgagtgcttgtttgccagctctacttggccattctgtttctcactctgaggctgttggc
tccgacgtagaactctgtgaactattcttaagtttgccgtctatcaagcaggatagtcta
attcgtgacgacaacaaactgattttgttagcctctcttagcgactctcttgaatacgta
gcagactctattgagaggcttggacaagcagttcctcgtgcagcaagtcaatctgaagat
aatagcaggaatcaagcaacttctcctaggaacctggcatcatttgctgatgagtacaga
aaacttgcgactgattgcctaaaggttctacgtgttgagatgcaattggaaacagtcttt
catcttcaggaaatgacgaatcgagaatacttggaggatgaggatgctgaagagcccgac
gactttgtgatttctcttacttcacagataacacgtagggacgagggaatgtcgcctttc
atctctggtgagaagcgcaactatgtttttggtggcatttgtggaattgcagcgaatgcg
tccattaaggctttggctgacatgagatcgataaacctttttggagttcagcaaatttgt
cggaacactattgcattggaacaggccatggcagctattccatatgttgatggtgaaagc
gtacaacagaacctagatcgtgtccgtacttactttgaactactaaacatgccattcgag
gcgttgcttacattcatagcggaacatgaccaaatgtttacacccacagagtattctaat
cttctaaaggtgaatgttcctggaagagatactcctacagatgctcaatctcgcctttcg
gaaattctttctcactaa
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