Brassica napus (rape): 111202932
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Entry
111202932 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bna03012
]
111202932
Translation factors [BR:
bna03012
]
Eukaryotic type
Initiation factors
eIF-5
111202932
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
111202932
NCBI-ProteinID:
XP_048622446
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All DBs
Position
C8:complement(30384808..30389240)
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AA seq
1004 aa
AA seq
DB search
MDRKNTSACRGDEDHPFALSSKGGENPKNKSYNVRFDLLGIEDYEEETGDDVNVELSDEL
MLGIQVNEETNTKSDDVGETSRSKKKKKNKSGKTPHKEEDXLDKILAELGITPVSPAQPE
LVPPAEDGSKDGEEETVVSVSAKKRXKKDKDNKVSASSVEAKDGPSQPHKKVPKHILEMQ
EMVARRKEAEEMKKKEEEEKLRKEEEERRIQEERERGAEEIKQKRKIREKEKMLKKKQEG
GILTEKQKRDKAYKNKMLSDAGMLLASDKNTDSSKRPVYGNKRKPARAKENDSASVLTKE
KHADVVPSPEPDKKEEAGDEEDDWEAKSDDSVNIMGDYDDDGEDTPWLVIKKEIKDTASK
AHYSGPVTDRLALKAGVSCKPQKSKPKMDDATKRSNDDSVVNEVAKESLRSPICCIMGHV
DTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELRPDAKLKVPGLLVID
TPGHESFSNLRSRGSNLCDIAILVVDIMHGLEPQTIESLNLLRKRNTEFIVALNKVDRLY
GWKTCKNAPIEKALALQSKDVVIEFNMRLTHVITQFKEQGLNTEIYYKNKEMGDTFSIVP
TSAISGEGIPDLLLYLVMWSQKTMVEKLTFVDKVQCTVLEVKVIPGHGTTIDVILVNGVL
HEGDQIVACGSQGPIITTVRSLLTPHPMKELRVKGTYLHHRKVKAAQCIKITAQGLEHAV
AGTSLHVIGPDVDIEEAKKTAMEDMKSIMSWVDKSGEGVYVQASTLGSLEALLEFLKSPD
VKIPVSGIGLGPVHKKDIMKAGVMLEKKKEYATVLAFDVKITTEARELADNMGVKIFCAD
IIYHLFDQFKGYVKGVRDEERKETASEVVFPCVLKILPNNVFKRGNPIILGVEVIDGILK
VGTPICFLKEIGKSRVFLDLGRVASIHKDKKPLDDAKKGQQVAIKIIASNPGEEKTFGED
FGIEDELVSHISRRSIDILKTLYRDELKSEFKLVLKLKMLFKIQ
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggatcggaagaacacgagcgcgtgtagaggagacgaagatcatccctttgccttgtcc
tccaagggaggtgaaaaccctaagaataaatcatataatgtaaggtttgatctgcttggt
attgaagattacgaggaagagacaggggatgatgttaatgttgaattgagtgatgagtta
atgcttggaatacaagttaacgaagaaactaatactaagagtgatgatgttggggaaacc
tcgaggagtaagaaaaagaagaagaacaagagtggaaagactccacataaagaagaagat
nntttggacaagattcttgcagagcttgggatcactcctgtttcaccagcacaacctgag
ctagttccaccagcagaagatggctcaaaggatggagaagaagagactgtcgtgtcagtt
tcagcgaagaaaaggnagaagaaggacaaggacaataaagtgtctgcttcttccgtggaa
gctaaggatgggccatcacagcctcataagaaagttcctaaacacattctagagatgcaa
gagatggttgcgcggcggaaagaagctgaagagatgaagaagaaggaagaggaagagaag
ttgaggaaagaggaagaggagcgccgcattcaggaagagcgagaaaggggagctgaagag
attaaacagaagaggaagataagggaaaaggagaagatgctgaagaagaagcaagaagga
gggattcttacagagaagcagaagagggacaaggcttacaagaacaagatgttgtctgac
gctggaatgcttcttgcttcggataagaacactgattcttcaaagcgtcccgtttatggc
aacaaaagaaaaccagctcgcgcaaaagaaaacgactctgcttctgtcctgacaaaagag
aaacatgcagatgtagtaccttcacctgagccggataagaaagaagaagctggtgatgag
gaggatgattgggaagcaaaaagtgatgattctgttaatataatgggtgattatgatgat
gatggggaagatacaccttggcttgtgattaagaaagagatcaaagacactgcttcaaag
gcccattattcaggtcctgtcactgatagactagcattgaaggctggagtttcgtgcaag
ccacaaaaatctaaacctaaaatggatgatgctactaaaaggagtaatgacgactcagta
gttaatgaagttgctaaagaaagtcttcggtctcccatttgctgcatcatgggacatgtt
gatactggtaaaacaaagctgttggactgcatcagaggaacaaatgttcaggaaggagaa
gctggaggtatcactcagcagattggtgcaacttatttccctgcagaaaacatccgtgag
aggaccaaggagttaagacctgatgcaaaactcaaggtgccaggtctattggttattgat
acgccaggacacgagtcattctcaaatctacggtcaaggggttcaaacttgtgtgacatt
gcaattctagtggttgacataatgcatggtctagagccacaaaccatagagtctcttaat
cttttgagaaagaggaacacagagttcattgttgccttgaataaggttgataggctatat
gggtggaaaacatgcaagaatgctcctatagagaaggctttggcgctgcaatccaaagat
gtggttattgaatttaacatgaggctcactcatgttataacccagttcaaagaacaagga
ctcaacactgagatttattacaagaacaaagaaatgggagacactttcagtattgtgcct
actagtgctatcagtggggaaggaattccagatctgttgctatatttggttatgtggtct
cagaaaacaatggttgagaaacttacatttgttgacaaagtgcagtgtaccgtccttgag
gtcaaagttattccaggccatggtacaacaattgatgttattttggtcaacggtgtactc
catgaaggtgatcaaatcgttgcttgtgggtcacagggaccaattataacaactgttaga
tcattattgactcctcatcccatgaaagagctacgtgtgaagggtacatatctgcatcat
agaaaagtaaaggctgcgcaatgtatcaagattactgcacagggacttgaacacgccgtt
gctggtacttccttacatgtgattggacctgatgtggacatagaagaagccaagaaaact
gccatggaagatatgaagtcaatcatgagctgggttgacaaaagcggtgaaggagtttat
gtacaagcttcaacgttagggtccctggaagcattactagagttcttgaagtcaccagat
gtgaaaatacctgtcagtggtattggcctaggaccagtgcataaaaaggatatcatgaag
gccggagtaatgctagagaagaagaaagagtacgctacggttttggcttttgacgtgaag
ataactacagaggctcgtgaactagctgacaacatgggagtcaagatattctgcgctgat
attatctatcatctgtttgatcagttcaagggttatgtcaagggtgtccgagatgaagaa
aggaaagaaacagcatctgaagtagtgtttccatgtgtccttaagattttaccaaacaat
gtcttcaaaagaggaaaccccatcatccttggagttgaggtcatcgatggtatactcaag
gttggaactcccatatgctttctaaaagagattgggaagtcgagagtgtttctggatctt
ggtcgcgttgcatctattcataaagacaagaagccacttgacgacgccaagaaaggacag
caggttgctattaagatcattgcctctaaccctggagaagagaaaacgtttggagaggac
tttggtatagaagacgagcttgtcagtcatatttctaggagatccatcgacatactcaaa
acactctacagggatgagttgaagagcgagttcaagcttgttttgaaacttaaaatgttg
ttcaagatacaatag
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