Brassica napus (rape): 111204203
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Entry
111204203 CDS
T04128
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111204203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111204203
03009 Ribosome biogenesis [BR:
bna03009
]
111204203
04131 Membrane trafficking [BR:
bna04131
]
111204203
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
111204203
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111204203
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111204203
Membrane trafficking [BR:
bna04131
]
SNARE
SNARE associated proteins
Others
111204203
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111204203
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111204203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
AAA_18
ATPase_2
Parvo_NS1
Viral_helicase1
IstB_IS21
ABC_tran
Vps4_C
AAA_7
NACHT
AAA_lid_PRS2_C
NB-ARC
TsaE
AAA_24
DUF815
Zeta_toxin
ResIII
Acyl-CoA_dh_2
Motif
Other DBs
NCBI-GeneID:
111204203
NCBI-ProteinID:
XP_022554158
LinkDB
All DBs
Position
C3:complement(555796..558973)
Genome browser
AA seq
810 aa
AA seq
DB search
MSSKPESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPNAMEKLQLFRGDT
ILIKGKKRKDTICIALADESCEEPKIRMNKVVRSNLRVRLGDVVSIHQCPDVKYGTRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGSDLAALCTE
AALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAA
DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLSIF
KACLRKSPVAKDVDVRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRGENP
EAMEEDMVDDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFDP
TAAAGRTTGGAAADPFATSGAAADDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaacctgaatcatccgactcgaaatcgaagaaggacttcagcacagctatc
ctcgagaggaagaagtctccaaaccgacttgttgtcgacgaagccatcaacgatgacaac
tccgtcgtctctctccaccccaacgccatggagaagctccaactcttccgtggcgataca
attctcatcaagggtaagaagaggaaggacactatatgcatcgcccttgctgatgaatcc
tgcgaggagcctaagatcagaatgaacaaagtcgtgaggtccaacttgagagtcagactc
ggagacgtcgtctccattcaccaatgccctgacgtcaaatacggaacacgtgtccacatc
ttgcccgttgatgacaccgtcgaaggagtcaccggaaacctctttgacgcttacctcaaa
ccttacttcttggaggcgtaccgtccggtgaggaagggcgatctcttcctagtccgagga
gggatgaggagcgtggagttcaaagtcatcgaaaccgatccagcagagtactgcgtcgtc
gctccagacactgagatcttctgcgagggcgagccaatcaagagggaggacgaggagagg
ctagacgaagtgggttacgacgacgttggaggcgtcaggaaacagatggctcagataaga
gagctcgttgagcttcctctgaggcatccgcagctcttcaagtccatcggcgtgaagccg
ccgaaggggatcctcctctacggacctcctggttcaggaaagactctcatcgctcgcgca
gtggctaacgaaacgggagcgttcttcttttgtattaatgggcctgagatcatgtccaag
atggcgggggagagcgagagtaatctcaggaaggcgtttgaggaggcggagaagaacgct
ccttcgattatattcatcgatgagattgactccattgcgcctaagagggacaaaactaac
ggtgaggttgaacggaggatcgtctctcagttgcttacccttatggatggactgaagtca
cgtgcgcatgttatcgtcatgggagctaccaaccgtcctaatagtattgatccggcgttg
aggaggtttgggaggttcgacagggagattgacatcggtgttcctgatgaggttgggcgt
cttgaggttcttaggatccacaccaagaacatgaagctagctgaagatgttgatcttgaa
agaatctccaaggacacgcacggatacgtcggctctgatcttgcggctctgtgcactgaa
gctgctcttcagtgtatcagagagaagatggatgtgattgacttggaggatgagtctatc
gacgcggagattctcaactccatggcggtgtctaatgaacacttccacaccgctcttggg
aacagcaacccgtctgcactccgtgaaaccgtcgtggaggttccaaacgtctcctgggag
gatatcggagggcttgagaatgttaagagagagctgcaggagactgttcagtaccctgtg
gagcatccagagaagtttgagaagtttgggatgtctccatcgaagggagtgctcttctac
ggtccacctggatgtgggaaaacgctcttagccaaagccatagcgaacgagtgtcaagcg
aacttcatcagcgtcaagggacctgagcttctcacaatgtggttcggagagagcgaagcc
aacgtccgtgagatcttcgacaaggctcgtcagtccgctccttgcgttctcttcttcgac
gagctggactcaatcgctactcagagaggaagcagcgtgggggacgcgggaggggcggcc
gatagagttttgaaccagcttttgacggagatggatgggatgaacgccaagaagacagtc
ttcatcatcggagcgacgaacaggcccgacattatagatccggctctcctccgaccaggg
agattggatcagctcatctacattcctcttcccgatgaggattcgcgtctcagcatcttc
aaggcgtgtttgaggaagtctcccgttgctaaagacgttgacgtgagggccctcgctaag
tacactcaggggttcagcggcgctgacatcactgagatttgccagagggcgtgcaagtac
gctattagagagaacatcgagaaggatattgagagggagcgtaggaggggggagaatccg
gaggccatggaggaagatatggtggatgatgaggtggcggagattagagctgcgcatttc
gaggagtcgatgaagtatgcgaggaggagtgtgagcgatgctgatattcgcaagtaccag
gcttttgctcagacgctgcagcagtcgagagggattgggagtgagttcaggtttgatcca
accgcggctgctggacgtactactggtggtgcagctgctgatccctttgctacttcaggg
gctgctgcagatgatgatgatctctacagttaa
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