Brassica napus (rape): 111204288
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Entry
111204288 CDS
T04128
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
bna
Brassica napus (rape)
Pathway
bna00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
111204288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
111204288
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
111204288
Membrane trafficking [BR:
bna04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
111204288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
111204288
NCBI-ProteinID:
XP_022554353
LinkDB
All DBs
Position
C3:3225429..3231216
Genome browser
AA seq
1020 aa
AA seq
DB search
MDLDKFLCWVVLLLGIFFSTVESRYMVYNTSHTMVQGKLNVHVVPHSHDDVGWLKTVDQY
YVGSNNSIQVACVQNVLDSIVPALLADKNRRFVYVEQAFFQRWWREQSEEIKTIVKGLIR
SGQLEHINGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGHSAVQAY
LLGAEVGFDSVFFGRIDYQDREKRKGDKSLEVVWRGSQSLGSSSQIFAGAFPKNYEPPPG
GFYYEITDDSPVVQDDPDLFDFNVQERVNAFVAAALDQANITRTNHIMFTMGTDFRYQYA
HTWFRQMDKLLHYVNLDGRINALYSTPSIYTDAKHAANEAWPLKTEDYFPYADRVNAYWT
GYFTSRPALKRYVRVMSGYYLAARQLEFFKGRSEKGPNTDSLADALAIAQHHDAVSGTSK
QHVANDYAKRLAIGYVEAESVVATSLAHLTKLDPATFQQCLLLNISYCPSSEINLSEGKS
LTVLAYNPLGWKRVDIVRLPVVSGDIAVHDSEGHEVESQLVPFTDEYAALRSYHAEAYLG
HAPTQVPKYWLVFSVSVPPLGFTTYTISTAKKTGGYSSKSHVSRYQKGEQSTVDVGHEHL
KLSFSTDQGKAINYVNSRTSMTEPLKQTFSYYSSYNGTKDKEPQNSGAYVFRPNGTFPIK
PEGQVPLTVIRGPLVDEVHQQINPWISQVTRVYKGKEHVEVEFIVGNIPIKDGVGKEVVT
QISSSLKSDKTFYTDSSGRDYIKRIRDYRSDWKLEVNQPVAGNYYPINHGIYLQDSQKEF
SVMVDRAIGGSSIVDGQVELMLHRRLLLDDSRGVAESLNETTCVKDKCTGLTIQGKYYYR
IDPSGEGAKWRRTFGQEIYSPLLLAFAHQDDGKPMSFGAASFSGMDSSYSLPDNVALLTL
QELDDGNVLLRLAHLYEVGEDKDLSGVATVELKKLFPGKKIAKVTEMSLSANQERSVMEK
KRLVWKVEGEGSNGEMKNVKRGREIDPRKLVMELYPMEIRTVLIRLERPPSHSHVYRFDA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgacaagtttctgtgttgggttgttttgctactgggaatcttcttctcaacg
gtggaatcaagatacatggtctacaatacttcacataccatggtccaaggtaaacttaat
gtccatgtggttcctcattcccacgatgacgttggttggctcaagactgttgaccagtac
tacgtcggctctaacaactccatccaggttgcttgtgttcagaatgtgctggattcgatt
gttcctgcactgttggctgataagaatcgcagattcgtttatgttgaacaggcgtttttt
cagcgatggtggagagaacaaagtgaggaaatcaaaaccattgtgaagggacttatacgc
tcaggccagctagagcacataaatggtggtatgtgtatgcatgatgaagcagcgccacac
tacatagacatgattgatcagacgactctcgggcatcgtttcatcatcagagagttcaat
gtgactccaagaatcggttggcagatcgatccgtttggacattctgcagtgcaggcttac
ttgctaggcgctgaagttggattcgactcagtctttttcggtcggatagattaccaagat
agggagaagcgtaaaggggacaagagtcttgaagttgtctggcgaggctcccagagtctc
ggttcttcttcacagatttttgctggtgctttccctaagaactacgaacctccacctggt
ggattttactatgaaatcaccgatgattcccccgttgtccaagatgatccggacctgttt
gatttcaatgttcaagagcgagtgaatgcctttgtagctgcagctttagatcaggccaac
attactcgaacgaatcacatcatgttcaccatgggaacagattttaggtaccagtatgca
cacacctggtttcgacaaatggacaagcttcttcattatgttaacctcgatgggcgtatc
aatgcactctactctactccttcgatatacacagatgcaaaacacgctgcgaatgaggct
tggcctctgaaaacagaggactatttcccttacgcagaccgtgtaaatgcttactggact
ggatattttacaagtaggccagcacttaagcgttatgtcagagtgatgagtggctactac
ttggcggcaaggcagctcgagtttttcaaagggagaagtgagaagggtcctaatacagat
tcgctagcagatgccttagcaattgctcagcatcatgacgctgtttctggtacatcgaaa
cagcatgtggctaatgattatgccaaaagactagcaataggctatgtggaggctgagagt
gtggttgctacttctcttgctcatttgactaaactagatcctgcaacgttccaacagtgt
ttgctgctgaacataagttactgcccctcgagcgaaatcaacttatccgagggaaaaagt
ttgaccgtattggcttataacccacttggatggaagcgagtggacattgtccggcttcct
gttgtgagcggagacattgcggtgcatgactctgagggacacgaagttgagtctcagctc
gttccatttacggatgaatatgcggccttaaggagctatcatgcggaggcatacttaggt
catgcccctacacaggtgcctaagtattggcttgtgttttcggtttctgtgcctcctctt
ggtttcactacttacactatctccactgctaagaaaacaggtggatattctagcaaatca
catgtctccagataccaaaaaggcgaacagtcaactgttgacgttggtcatgagcatctg
aagcttagtttctccactgatcaagggaaagcaatcaattatgttaacagcagaacctcg
atgacagaaccactaaaacagacgtttagctactactcttcatacaatggaacaaaggac
aaagaacctcagaactcgggtgcgtatgttttccgtccaaatggcacattcccaatcaaa
cccgaaggacaggttcctttgactgttatacgtggaccactggtggatgaagttcatcaa
cagataaatccgtggatctctcaggtcactagagtttacaagggcaaggagcatgtggaa
gttgaatttattgttggtaacataccgattaaagatggagttggcaaagaagtcgtgact
cagatctcaagctccctgaaaagtgacaagactttctacacagactcaagtggccgtgac
tacatcaaaaggatccgtgattatcggtcagactggaagctagaagtcaaccaacctgtt
gcaggaaattactacccgataaatcatggaatatacctgcaagatagtcagaaggagttc
tcggtgatggtggacagagcgattggagggtccagcattgtggacgggcaagttgagctt
atgcttcataggagactgctccttgatgactctagaggtgttgcggagtctctaaacgag
acaacgtgtgttaaagacaagtgtactggacttactatccaaggaaaatattactacaga
atcgatccatctggagaaggtgcaaaatggcgaagaactttcggacaagagatctactcg
ccactcctcttggcctttgctcatcaggatgatggaaagccgatgagttttggtgcagca
tcattctccgggatggattcatcctacagtttaccagacaatgtcgcacttcttactctt
caggaactggatgatgggaacgtgctcctgcgtctagctcatctttacgaggtgggagag
gacaaagatctttcaggagtggcaaccgtggagctgaagaagcttttccctgggaaaaag
atagcgaaagtgactgagatgagcctgtcagcaaatcaagaaagaagtgtaatggagaag
aagaggttggtgtggaaagtagaaggtgaaggatctaatggagaaatgaagaatgtgaag
agaggaagagaaatagatccaagaaagctagtgatggagctttaccctatggagattagg
acagtgttgatccgcttggagcgaccaccttcccactctcatgtatacagattcgatgct
tga
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