Brassica napus (rape): 111204312
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Entry
111204312 CDS
T04128
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
111204312
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
111204312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
Cap2_linker
ABC_tran
AAA_16
Y4kK_2nd
AAA_25
NACHT
AAA_27
AAA_13
Motif
Other DBs
NCBI-GeneID:
111204312
NCBI-ProteinID:
XP_022554404
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All DBs
Position
C3:3825379..3829311
Genome browser
AA seq
1049 aa
AA seq
DB search
MSERRAKRLKTSRGEDDFLPGNIVEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLV
CAIALCLGGEPQLLGRATSVGAYVKRGEDSGYVKITLRGKTSEEKFTVFRKIDTRNKSEW
MFNGNSVSKREVVEVIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP
VHHRDLVEKSRELKQLERAVAKNGETLTQLKALVDEQEKDVERVKQRELLLTKVDSMKKK
LPWLKYDKKKSEYQAAKKKLKEAEKKLDEAARSLSNVKEPVEKQKKERGEMESKCKKVKK
VLETNGYKRSDLLEKENEAEARVVATYKELEELKKQEEHRQERILKATEDLAAAEQELKD
LPVYEQPVAKLEELKSQVTELHHNINRKKNQKAENETLLSQKRHTLRQCVDKLKEMENAN
NKLLNALHRSGADRIYEAYQWVQQNRHEFKREVYGPVLLEVNVPNRENACYLEGHISYYI
WKSFITQDPDDRDLLVRNLKRFDVPVLNYVRDSGNHSAPFHISDHMRSLGLHSRLDQIFD
APGAVKEVLTSQFGLDDSYIGSEITDQRAEEVSKLGVTDFWTPDNHYRWSSSRYGGHSSA
SVDSVHPSRLLLCGMDVGELEKLRSRKDELEDSISSIEETRKSLQTEQRLLEEAAAKLHK
EREEIINVSHMEKKKRRELESRYQQRKKKLESLEQEEDMDASVANLIEQASKANADRYAY
AINLKELLVEAAANKWSYAEKHMALIELERKIRESEINIKQYEKTAQQASLSVEYCKKEV
EEKQLQLAAAKRDAESIAIITPQLKKEFMEMPTTIEELEAAIQDNFTQANSILFVNQNIL
QEYEHRQSQIETITTKLEADKRDLSRCLKEIESLKEKWLPTLRRLVAQINETFSHNFQEM
AVAGEVSLDERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQDLT
NCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNI
MNGPWIEQPSQVWSFGDSWGNLMRRAEAS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgccgcgcgaagcgactcaaaacctccagaggagaagatgatttcctccct
gggaacattgtcgaaatcgagcttcacaacttcatgactttcaaccacctcgtttgcaag
cctggttcccgtttaaacctcgtcatcggaccaaacggatcaggcaaaagctctctcgtc
tgcgccattgcgctttgtctcggtggcgagcctcagcttctcggcagagcgactagcgtc
ggcgcttacgttaagcgtggagaggattctggctacgttaagataactctcagagggaaa
actagtgaggagaagttcacggtttttcggaagattgatacgaggaacaagtctgagtgg
atgtttaatgggaactctgttagtaagagagaggttgttgaggtcattcagaagtttaac
attcaggttaataatctcacgcagtttctgccgcaagatagggtttgtgagtttgctaag
ctgacgcctgtgcagcttttggaggagactgagaaagctgttggtgatcctcagttgcct
gtgcatcaccgtgaccttgttgagaagagccgcgagctgaagcagcttgagagagctgtg
gcgaagaatggggagacgctgactcagcttaaggctcttgttgatgagcaagagaaggat
gtggagagggttaagcagagggagttgcttttgacgaaggttgattcgatgaagaagaag
ctgccgtggctgaagtatgataagaagaagtcggagtaccaggctgctaagaagaagttg
aaggaagccgagaagaaattggatgaggctgcgaggagtttgagtaatgtgaaggagcct
gttgagaagcagaagaaggagaggggagagatggagtcgaaatgcaaaaaggttaagaaa
gttctggagactaatgggtataagcgttcggatttgctcgagaaagaaaatgaggcggaa
gcacgtgtagtggcaacgtacaaagagcttgaggagctgaagaaacaagaagagcatcgc
caagagaggattctgaaagctaccgaggatctggctgctgcggagcaagaactcaaagac
ctgcctgtatatgaacaacctgtagccaaacttgaagagttgaagtctcaggttacagag
ctgcatcacaacattaaccggaagaagaatcagaaggcggagaatgagaccctcttgtct
cagaaaagacacaccctgcggcaatgtgtagataagctgaaggagatggagaacgcaaat
aacaaactcttgaatgcgctgcatcgctctggagctgacaggatctatgaagcgtatcaa
tgggtgcagcagaatcgtcatgagtttaaaagggaagtatatggtcccgttttgctagag
gttaacgtcccaaatcgagagaacgcgtgctatttggagggtcatatttcttattacatc
tggaagtcttttatcactcaggatcccgacgacagagatttgttggttaggaatctaaaa
cgctttgatgttcctgttctaaactatgtgagagatagcggcaaccactcggctcccttt
catatctctgatcatatgcgttctcttgggcttcattctcggcttgatcagatatttgat
gctcctggcgctgttaaggaggtattaacttctcagtttggtctagatgactcatacatt
ggatcggagattaccgatcagagggctgaagaagtatctaagctgggtgtcactgatttt
tggacaccggacaatcactaccggtggtcttcctcaaggtatggtggacattcctctgca
agtgtagactctgtacatccatcacgtcttctgttatgtgggatggacgttggagagctt
gagaaactgagatcaagaaaggatgaactagaagactctatatcatccattgaagaaact
cgcaagagtcttcaaacagagcaaagactgttggaagaagcagcagctaaacttcataaa
gagagggaggagattattaacgtctcgcatatggagaagaaaaaacgccgcgagttggaa
tcacgttaccaacagaggaagaagaagcttgagtccttggagcaagaagaggacatggat
gcttcagtcgctaatctgatcgagcaggcttccaaagctaacgctgaccgctatgcatac
gcgatcaatctcaaggagctgctcgtggaagctgctgctaataagtggagttacgcggag
aagcatatggctttgattgaattggaaagaaaaatcagagagtcagagatcaacatcaaa
cagtacgagaagacggcacagcaggcatccctcagcgttgagtactgtaagaaagaggtt
gaagagaagcaactgcagctagcagctgccaagagggatgcagaatccattgcaatcatc
actccacagctcaaaaaggagttcatggagatgccaaccacgatagaagagttggaagct
gctatacaagacaatttcactcaagccaactcgatcctctttgtaaaccagaacatactc
caagagtatgagcatcgccagagtcagatagaaactattaccacaaagctcgaggctgat
aaaagagacttgagcagatgcttgaaagaaatcgaatctctgaaggagaaatggcttcca
acgctgagaaggcttgttgctcagataaacgaaactttcagccataacttccaagaaatg
gctgttgcaggggaagtttcgctggatgagcgtgacaccgactttgatcaatacgggata
catatcaaagtgaagttcagggaatctgggcagcttcaggttctaagttctcaccaccag
tctggaggagagcgttctgtgtcaaccatcctctacctcgtctctcttcaagatctcaca
aactgtcctttcagggttgttgatgagattaatcaaggtatggatcctataaacgagagg
aagatgtttcaacaactggttagagctgctagccaaccaaacacaccgcagtgtttctta
ctgacgccaaagctgttgcctgagcttgagtacagtgaagcgtgtagcatactgaacatc
atgaacggtccttggatcgagcagccttcgcaagtttggagctttggtgatagttgggga
aatcttatgagacgagccgaagcgagttaa
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