Brassica napus (rape): 111204508
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Entry
111204508 CDS
T04128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111204508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111204508
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111204508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111204508
NCBI-ProteinID:
XP_022555173
LinkDB
All DBs
Position
C3:24727157..24730724
Genome browser
AA seq
471 aa
AA seq
DB search
MQSDSGKLFIGGISWDTDEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA
ETVITEKHNIDGRLVEAKKAVPRDDQNTVTRSNSSSLQGSPGGRTRKIFVGGLPSSITES
DFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKR
AVPKELSPSPARSSPLGAGYSYGVSRVNNLLNGYAQGFSPGGYGLRMDGRFSPIGAGRSG
FASFGGSGYGQGLPAGFTGGSSFNGSVDYGRGMSPYYIGNTNRFGYEGGSGGGGNSSFFS
SNLWGNNGGRSYNNNAANSNSNTYMGGGSTSGNNTLNGPFGNWGAPGGGNSGVGNENLNF
GYGGNGESGFGLGGARNIGPPSKAAPSSSFSSASAGYDGAGLAEFYGNGAVYSDPTWRSS
APETEGPASFSYGIGGGGGGPSSDVSARSSSPGYVGSYSVNKRQPNRGIAT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagacagtggaaagctcttcatcggcgggatatcgtgggacaccgatgaggaa
cgtctcaaggagtatttcagcagctttggtgaagtcatcgaagctgtgatcttgaaagat
cgcaccactggtcgtgcacgtggcttcggcttcgtagtctttgctgatccagctgttgca
gagactgttataacggaaaaacataacattgatggaagattggttgaagccaagaaggct
gttcctagagacgaccaaaacacagtaacaagaagcaacagcagtagcctccaaggatca
ccaggaggtcggacaagaaagatctttgttggagggttaccttcttctatcacagagagc
gacttcaaaacctattttgagcagtttgggacgactaccgacgtggttgttatgtatgat
cacaacacgcaaaggcctagaggcttcggattcattacttatgactccgaggaggccgtt
gagaaagtgctgctcaagacgttccatgaactcaacggtaaaatggtcgaggtcaagcga
gctgttcctaaggagttgtctccgagtccagctcgcagcagcccgctcggtgctggctac
agctatggggttagtagagtcaacaacctccttaatggatatgctcaagggtttagcccc
ggaggctatgggcttaggatggatggtaggtttagtcccattggtgctgggagaagcggg
tttgcgagtttcggtgggtctgggtatgggcaggggttgcccgcagggttcactggagga
tcaagtttcaatgggagcgtagactatgggagagggatgagcccttactatattggtaac
acgaaccggtttggttatgaaggaggcagtggaggaggggggaactcgtctttcttcagt
tcgaatctttggggaaacaatgggggtcgtagctataacaacaacgctgcaaactctaac
tccaatacatacatgggaggaggatcaacgagtgggaacaacacacttaacggtccattt
ggtaactggggtgctcctggaggagggaacagtggtgttggtaacgagaatttgaacttt
ggttatggaggaaacggtgaatctggttttgggttgggaggagcaaggaacatagggcct
cctagcaaggcagcaccatcgtcttcattctcttctgcctcggcgggttatgatggagca
ggacttgcagagttttatgggaatggtgcggtttatagtgatcccacgtggagatcatca
gctcctgagacagaagggcctgcttcttttagctatgggattggaggaggaggaggaggt
ccttcttcggatgtttcagctagaagttcatctccaggttatgttggtagttacagtgtg
aacaagagacaaccaaacagaggaattgctacttag
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