Brassica napus (rape): 111204514
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Entry
111204514 CDS
T04128
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111204514
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111204514
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GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111204514
NCBI-ProteinID:
XP_022555181
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Position
C3:24792229..24795198
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AA seq
438 aa
AA seq
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MYQKTIIFLTILLTSLRSCSSSYPFDPRYDHSISPNAYYETSHLHGHITHNRHMKDRHAH
APRSSDRAFNVNSFGAKANGNDDSQAFMKAWEAACSSEGTVYIVVPENRAYTLKSVKFSG
PCKSSLIVFKIYGKIEAWKNPSDYRERRFWIVFQTVDNLRVEGGGRIDGNGKIWWPKSCK
INPELPCQEAPTAVTFVECNNLMVRNIRLENAQQMHMRVQNCENVKALNLMVTSPGHSPN
TDGIHVTGTRNILIQDSIIRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGAHNSEA
YVSNVVVSKATLIGTTNGVRIKTWQGGHGMAKNIIFQDILMKNVTNPIIINQDYCDQTKA
CPEQKSAVQVSNVLYKNIHGTSSRPEAIKFECSKSIPCQGISMQNVKLVDDITKQDVSKA
SCSNVKLKTSGHHFSLCT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaaagaccataatcttcttaacaatactcttaacgtctcttcgttcttgttct
agcagctacccgtttgatcctagatatgatcattccatttctcccaatgcttattacgaa
accagtcacttacatggtcacattacacacaacaggcacatgaaagatcgccatgcacat
gctcctagatcttctgatcgagcttttaacgttaactctttcggtgctaaagccaatgga
aacgacgattctcaggcattcatgaaagcttgggaagcagcttgttcgtcagagggaaca
gtttacatcgttgttccggaaaatagagcttacactcttaaatcggttaaattctccggt
ccatgtaaatcatccttgattgtttttaagatttacggtaagattgaggcatggaaaaac
ccatcagactacagggaacgtaggttctggattgttttccaaacggttgataaccttcgt
gttgaaggcggtggacgcatcgatggtaatggaaaaatttggtggccaaaatcttgcaag
atcaaccctgaacttccatgccaggaagctcccacggcggtaacgtttgtggaatgcaac
aacttgatggtaagaaacattaggttggaaaacgcacagcaaatgcatatgagggttcaa
aattgcgaaaacgtgaaggctttgaatcttatggtcacgtctccgggtcatagtcctaac
accgatggcattcacgttaccggaactcgcaatatcctcattcaggactctatcatccgt
accggtgatgactgtatatcgatagtgagtgggtcggagaatgtgagagcgacgggcatt
acatgcgggccgggtcatggaatcagcattgggagtttgggagctcataactcagaagca
tatgtttctaatgtggtagtcagcaaagcaactctcataggaaccactaatggtgtgaga
attaagacttggcagggaggacatggaatggcaaagaacataatattccaagacatctta
atgaaaaacgttacaaacccaataatcatcaaccaggactattgtgatcaaactaaagca
tgtcccgaacagaaatctgcggtacaagtgagcaatgtattgtacaaaaacatacatggg
acgagttcaagacccgaagctataaaatttgagtgcagcaagagcattccatgtcaaggc
atttcaatgcaaaacgttaagttggtcgatgatattaccaaacaagatgtctctaaagct
tcttgctccaatgtgaagttgaagactagcggacatcatttctccctttgcacttga
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