Brassica napus (rape): 111205238
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Entry
111205238 CDS
T04128
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
111205238
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
111205238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
111205238
NCBI-ProteinID:
XP_022556482
LinkDB
All DBs
Position
C4:24358618..24361357
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AA seq
645 aa
AA seq
DB search
MVDLDDLLLEAAGRTNAAATRRRHSHPSSSRRREGSFSDGGSDSRDDSDEDRGYPASRKP
SVSQVPLKKRLEAEREARAEGGYGDGTSDREGDSSEESDFGDDLYKNEEDRQKLAGMTEF
QREMILAERADKKGDKNFTEKLRSKRENEKTTTPVSKKDTQPLPASRGVRSSARSADRAA
AKDDALNELRAKRMKQQDPAALKKLRDASKGGSGSRDFSSMKRKPLASSKFSSSSDSDRS
QSDDEGSNGGMVDSDDDRSDVPTYEDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIG
RSKSGPIYRLCMVKNVDAADPDKAYKLENKTTHKYLNVFWGNETSAARWQMAMISDGHPV
EEEYRQWIREVERTNGRLPSKQDVSEKKEAIRRINSFVYSAETVKQMLQEKKSASVRPMN
VAAEKDRLRKELEIAESKNDQAGVERIKAKIKQLDVSRNKKGVDKKALKLYEMNKKNRAE
NFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNSGKDGGENEAAVAAAVKSNG
ADAEGENGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNLMHNFELPLSLAALQKYGGPQ
GVQKAFMARKQMTEATVGCRVVVNDGKRHGLTLTVSDYKRRRGLL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggttgatttagatgacttgcttttggaagctgctggtagaacaaacgcagctgctaca
aggcgccgtcattctcatccttcatcatccaggagacgtgaaggttctttctctgatggt
ggcagcgattcgagagacgattctgatgaagaccgtggctacccagcaagtaggaaaccc
tctgtttctcaagttcctttgaaaaagagattagaggcagagagagaagctcgagcggaa
ggaggttatggtgacggcacatctgatcgtgaaggcgacagcagcgaggagtctgatttt
ggagatgatctttacaagaatgaggaagacaggcagaagcttgctgggatgactgagttt
cagagagagatgattcttgctgaacgtgctgataagaaaggtgataagaactttactgaa
aagcttaggtccaagagagaaaacgagaagaccaccacccctgtttccaaaaaggacact
cagcctcttccggcatctcgtggtgttcggtcttctgctagatctgcagacagagcagct
gcaaaggatgatgctttgaacgagttgagggcaaagcgtatgaagcagcaggaccctgcg
gctctcaagaaactgagagatgcatcaaaaggcggttcaggtagcagagatttctcatcg
atgaagaggaaacctttagcttcctcgaagtttagtagctcaagtgacagtgataggtct
cagagcgacgatgaaggctccaatggaggaatggtggacagtgatgacgacaggtcagat
gtgcctacgtatgaggatattaaggagattacaattaggaggtctaagcttgctaaatgg
ttaatggagcctttctttgaagagcttatcgttggttgctttgtgagggttgggattgga
aggtcaaagagtggtccgatttatagactctgcatggtgaagaatgttgatgcagctgat
ccagacaaggcatacaagctagagaacaaaactacacacaagtaccttaacgtgttctgg
ggaaatgaaacctctgctgctcgttggcaaatggcaatgatctcagatgggcatcctgtg
gaggaagagtataggcaatggatcagagaggttgagagaacaaatggtcgcctgccttca
aagcaagatgtatcagagaagaaagaagcgatcagaagaatcaacagttttgtctactcg
gcggagactgttaagcagatgttgcaggagaaaaagtctgcatccgtcaggccaatgaat
gttgcggccgagaaagataggcttagaaaagagttggagattgcagagagcaaaaacgat
caagcaggtgtggagaggatcaaagctaagatcaagcagctcgatgtgtcacggaataag
aaaggagtagataaaaaagcgctcaaactctacgagatgaacaagaagaacagagctgag
aatttcaagaacgcatctgaggtgaaatcaatcactgctagtctcaaggctggtgaagct
ggatatgatccgttttcaaggaggtggacacgatcatcgaactactacaatggtaaaaac
agtgggaaagacggaggagagaacgaggccgcagttgcagcagcggtaaagagcaatgga
gcagatgcagaaggagagaacggtgttgaagcgacagaagcagctttagaagcggctgca
gaggcagggaagctaatagacacaagagctccaataggtcaaggagcagaacacaatctg
atgcataactttgagttgccgttatcgctagcggcattgcagaagtatggaggacctcaa
ggagtacagaaagcgttcatggcgaggaaacagatgacagaagcaacagtgggatgcaga
gttgttgtgaatgatggtaagagacatggacttacgttaactgttagtgattacaagaga
aggagaggtcttctctga
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