Brassica napus (rape): 111205562
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Entry
111205562 CDS
T04128
Name
(RefSeq) flowering time control protein FY-like isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111205562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111205562
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111205562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
NBCH_WD40
eIF2A
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
WD40_like
Beta-prop_RIG_1st
WD_LRWD1
SEO_C
PROPPIN
WDR54
Motif
Other DBs
NCBI-GeneID:
111205562
NCBI-ProteinID:
XP_022557354
LinkDB
All DBs
Position
C2:complement(2666901..2671422)
Genome browser
AA seq
644 aa
AA seq
DB search
MYGDSMQQQLPPMHHPPMMRQPSASSTNINPDYHHSSAPNHLDSHVDSFGGKRMRKHTQR
RAVDYTSTVVRYIQARTWQRDSRDMTSLQPTPAAAVDMLPPVAYSDNPSTSFAAKFVHSS
LNKNRCSINCVVWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNDI
WMVSGDDGGTIKYWQSNMNNVKANRTAHKESVRGISFCKTDLKFCSCSDDTTVKVWDFAK
CQEEISLTGHGWDVKCVDWHPTKSLLVSGGKDQLVKIWDTRTARELCSLHGHKNMVLSVK
WNQNGNWLLTASKDQIVKLYDIRTMKELESFRGHKKDVTSLAWHPIHEEYFVSGSADGSV
CHWIVGHENPQIEISNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWSRNRPADNPRDALT
MQNQGYNEQGFSNRLPDSFQPSEASPTPGAFVPGLTRNEGTIPGIGIAMPFDASSQGEHN
QPLPGGMAPPLPPGPHPSLIGSSQQQGYQQQQQHHQGHPQQIPPMPNMPHLQRPPPSHMP
LRPHHPRPMQMPPHMPPSSMPMSHQIPGPMGMQGGMNPQMSQGHYMGAPSGPFPGPPSSG
GPPMYPQGRGFNRPQMMQGYNNPFQQQPPPLPAGPPPNTNQQHQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtacggagattcgatgcagcagcagcttccaccaatgcatcacccgccgatgatgcgt
cagccctccgcctcttccaccaacatcaaccccgactatcaccattcctctgctccaaat
cacttggactcacatgttgacagttttggggggaaacgaatgagaaagcatacacagaga
agagctgttgattacacgagcaccgttgtgagatacattcaggctcgaacatggcagaga
gactcaagggatatgacctctttgcaaccaaccccagctgcagcagttgatatgcttcct
ccagttgcctattcagataatccttctacaagctttgctgccaagtttgttcactcgtct
ctaaacaagaaccgttgttcaatcaactgtgtagtgtggacaccttctggaagacgtctt
atcaccggctctcaaagtggggaatttactctttggaatgggcagtctttcaattttgag
atgattcttcaggcacatgatcaacctataaggtcgatggtgtggagccacaatgacatt
tggatggtttctggtgatgatggaggcacgataaagtattggcagagcaatatgaacaat
gtgaaggctaatagaactgctcacaaggaatccgttcgtggtataagtttctgtaaaaca
gatttgaagttctgttcgtgttctgatgatacaactgttaaagtgtgggattttgccaag
tgccaagaagaaatttcactaaccggccatggttgggatgtcaagtgcgtcgactggcac
cccacaaaatccctactagtttctggtggaaaagatcaacttgtcaaaatatgggatact
agaactgcaagagagctttgctcacttcatggtcacaaaaacatggtgcttagtgtgaag
tggaaccaaaatggcaattggcttttgacagcctcgaaagatcaaatagttaagctgtat
gatataaggactatgaaggagcttgaatccttccgtgggcacaagaaagatgtaacatct
ttggcgtggcatccaattcatgaagaatactttgtcagtgggagcgctgacggatccgtt
tgtcattggattgtcgggcatgaaaacccgcagattgaaatctcaaatgctcatgataac
agtgtttgggatcttgcatggcatcctattggatatcttctttgcagtggtagcaatgat
cacacaaccaagttttggtccagaaacaggcctgcagataatcctcgagatgcccttact
atgcagaaccaagggtataatgaacaaggttttagcaatcgcctgcctgatagtttccaa
ccatccgaagcatcgccaactcctggagcatttgttcctggactgacccggaatgagggg
accatcccaggaatcggaatagcaatgccgtttgatgcatcctctcaaggggaacataat
caacctcttccaggcggtatggctcctccgctgccacctggtccccacccatcgcttatt
ggaagtagccagcagcaagggtatcagcaacaacaacaacaccaccaaggacatccccag
caaatccctccaatgcccaatatgcctcatcttcagcgaccaccaccgtctcatatgcca
ttgcgtcctcatcatccccgccctatgcaaatgcctcctcacatgccaccttcctcgatg
cctatgtctcatcagatacctggaccaatggggatgcaagggggcatgaatcctcagatg
tcgcaaggccattatatgggtgctccttcgggtccatttccaggaccaccaagcagtggt
ggacccccaatgtatccccaaggacgtggtttcaaccgtccacagatgatgcaagggtac
aacaaccctttccaacagcagccgccgcctttacctgcaggccctccgccaaacaccaat
cagcaacatcagtag
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