Brassica napus (rape): 111206107
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Entry
111206107 CDS
T04128
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111206107
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
111206107
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
111206107
03019 Messenger RNA biogenesis [BR:
bna03019
]
111206107
03041 Spliceosome [BR:
bna03041
]
111206107
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111206107
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
111206107
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111206107
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111206107
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111206107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
111206107
NCBI-ProteinID:
XP_022558172
LinkDB
All DBs
Position
A2:complement(27177248..27179599)
Genome browser
AA seq
318 aa
AA seq
DB search
MMTSMEGMIEKGVLDDIIRRLLEGRGGKQVQLSECEIRQLCSNARQIFLSQPNLLELHAP
IRICGDIHGQYQDLLRLFEYGGYPPSATYLFLGDYVDRGKQSLETICLLLAYKIRYPSKI
YLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNSLPVAALIDDKILCMHGGLSP
ELENLNQIREIERPTEIPDNGLLCDLLWSDPDQKREGWSDSDRGISCTFGADKVDEFLDK
NDLDLICRGHQVVEDGYEFFANRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEIMKP
APASSSHPLKKVPKMGKS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgagtatggaagggatgatagagaaaggagtgttggacgatatcatcagaaga
ttgttagaaggcagaggaggcaaacaggttcagctatcagagtgcgagattcgtcaactc
tgctccaacgctcgtcaaatcttcctctctcaacccaatctcctcgagctccatgcccca
atccgcatctgcggtgatatccatggccagtatcaagatcttcttcggctattcgaatac
ggaggctaccctccatcagcgacctatctcttccttggcgactacgttgacagaggcaag
caaagtctcgagaccatatgtctactcctcgcttacaagattcgttacccgtcaaagatt
tatctcctgagaggcaaccacgaggacgccaagatcaacagaatctacggcttctacgac
gagtgcaagcgtagattcaacgtacgtctctggaagatctttaccgattgcttcaactct
ttacccgtggcagcgctcatcgacgacaagatcttgtgtatgcatggagggttgtcgccg
gagttggagaatttgaatcagattcgagagattgagaggcctactgagattccggacaac
ggtcttctttgtgatttgctttggtcggatcctgaccagaagagggaaggatggtctgat
agtgatagaggcatctcttgtacttttggagctgataaagtcgatgagtttttggataag
aatgatcttgaccttatttgccgtggccatcaggtagtggaagatgggtacgagtttttt
gcgaataggaggttagttacgatattctcagctccaaactatggtggagagtttgataac
gctggtgcattgttgagcgtggacgagtctcttgtttgctcttttgaaattatgaaaccg
gctccagcttctagtagtcatcctctcaagaaggtacccaaaatggggaagtcttga
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