Brassica napus (rape): 111206327
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Entry
111206327 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111206327
00071 Fatty acid degradation
111206327
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111206327
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
111206327
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
111206327
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111206327
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111206327
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
111206327
Exosomal proteins of breast cancer cells
111206327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
111206327
NCBI-ProteinID:
XP_022558650
LinkDB
All DBs
Position
C5:54287231..54292616
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AA seq
693 aa
AA seq
DB search
MDSSSSARCRINAIHSHLVTSSRSSPLIRSNPTAGEFCLDNGYSVALPEKLSTGDWNVYR
SARSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYGEVG
TARTAIGSGLVHHGITMGSTVGIYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVQFI
VNHANVQAIFCVAETLNSLLSGLSEMPSVRLVVVVGGLNESLPSLPASAGVKVVSYSVLL
NQGRSKPQPFVPPKPDDVATICYTSGTTGTPKGVVLTHANLISNVAGSSFSVKFFSSDIY
ISYLPLAHIYERSNQILTVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYNRIYDG
ITNAVKSSGGLKERLFNAAYNAKKQALLNGKNASAIWDRLVFNKIKDKLGGRVRFMTSGA
SPLSPEVMEFMKICFGARVLEGYGMTETACVISGMDEGDNLIGHVGSPNPACEIKLVDVP
EMNYTSADQPNPRGEICVRGPIVFRGYYKDEVQTKEVVDEDGWLHTGDIGLWLPGGRLQI
IDRKKNIFKLAQGEYIAPEKIENVYAKCKFVGQCFIYGDSFNSSLVAVVSVDPDVLKSWA
ASQGIKHGDPRELCNNPRVKAAVVSDMDTVGREAQLRGFEFAKAVTLVLEPFTLENGLLT
PTLKIKRPQAKEYFAEAITNMYKELAASDPTHR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcctcctccgcgcgctgccgcataaacgccatccactcccatctcgtcacg
tcctctcgctcctcccctctcatccgctccaatccaaccgccggcgagttctgtctcgat
aatggctacagcgtcgcgcttcccgagaaactgagcactggcgattggaacgtctacaga
tctgctcgatctccgttcaagctcgttagcagattccctgatcatcctgacatcgccact
ctccatgacaactttgagcatgctgttcatgattttcgggattacaagtacttaggaact
cgcgttcgcgtcgacggaacagttggagactacaaatggatgacgtatggtgaagttggt
acggctagaactgctataggttctggtttggttcatcatggaatcaccatgggatctact
gttggaatttactttatcaaccgcccagagtggctcattgttgatcatgcttgttctgct
tattcttatgtgtctgttcctttgtatgatactcttggtcctgatgctgtacaatttatt
gtcaatcatgcaaatgtgcaagccattttttgtgtggcggagacgttaaactccttgctt
agcggcttgtctgagatgccaagtgtacgcctcgtggtggttgttggagggctgaatgaa
tctttgccttcgcttcccgcatcagcaggagtgaaagtcgtctcatattcagtgttactg
aatcagggacgtagtaaacctcagccgttcgtaccaccaaaacccgatgatgttgcaacc
atatgctatacaagcggaacaactgggacccccaagggagtcgtattgactcatgcaaac
ttgatttcaaatgttgctggatccagttttagtgtgaagtttttctcttcagatatttac
atttcatatcttccgttggcacacatttacgaacgatcaaatcaaatcctaaccgtgtac
tttggagttgctgttggtttctaccaaggggacaatatgaaactactggatgatttggcg
gctctgagacctactgtattcagcagtgttcctcgattatacaacagaatatatgatggt
atcactaatgcagtaaaatcctctggcgggctgaaagagaggctcttcaatgctgcctat
aatgcaaagaagcaggctctcctaaatggaaagaatgcttctgcaatatgggacaggctg
gtttttaataagataaaggacaaacttggaggacgggttcgttttatgacgtctggggct
tcacctctgtctcctgaagtcatggaatttatgaaaatatgctttggagcaagggtttta
gagggatatgggatgacggaaacagcttgtgttataagtggaatggacgagggtgataac
ctcattggacatgttggctctcctaatccagcttgtgaaataaagcttgtggatgtcccg
gaaatgaactacacatcagcagatcagcccaatccccgcggcgaaatttgtgtgaggggt
cctattgtttttagaggctattacaaagatgaagttcaaacgaaagaagtggttgatgaa
gatggatggcttcacactggagatataggcctgtggcttccgggaggacgtctacagatt
attgacaggaagaagaacatcttcaagttggcgcaaggggagtacatagctccagagaaa
attgaaaacgtctatgccaagtgcaaatttgtggggcaatgcttcatatatggtgatagc
tttaattcatcattggtcgctgttgtatcggttgatccagatgtgcttaaaagctgggct
gcttcacaaggcattaagcatggagatccgagagaattgtgcaataacccgagagtgaaa
gcagcagtagtatctgacatggacactgttggaagagaagctcagttgagaggctttgag
tttgcaaaagctgtgacgttggtgctggagccatttacgctagaaaatggcttgttgaca
ccgacgttaaagattaagagaccacaagcaaaggaatatttcgcagaagcaataacaaac
atgtacaaggagcttgctgcttctgatcccacccaccgctaa
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