Brassica napus (rape): 111207429
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Entry
111207429 CDS
T04128
Name
(RefSeq) putative pectate lyase 11
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111207429
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111207429
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111207429
NCBI-ProteinID:
XP_022561182
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Position
C7:39425133..39429558
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AA seq
412 aa
AA seq
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MVSYSNNPFVYTFICLLSIGNTFVLSSSSLPHTQDPNLVVDEVNRSVFNASRRSLAYLSC
RTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRDGRIYVVTDAANDDPVNPRPGT
LRHAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCIKIHYETNIII
HGINIHDCKPGSGGMIRDGPRHTGWWVPSDGDAVAIFGGKHIWIDHCSLSNCDDGLIDAI
HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH
VVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEG
DMLLNGAYFRQSGAGASSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgtattctaataatccttttgtttacactttcatatgtctcctatcaatcggc
aacacgtttgtattatcttcaagttcgttgccgcatactcaagatcctaatctagtagtt
gacgaggttaatagaagtgtattcaatgcgtcaaggaggagcctcgcctacctatcttgt
agaacgggtaatcctattgatgattgttggcgttgcgatccaaactgggagacaaatcgc
caacggctagccgattgtgctatagggtttggcaaaaacgctatcggaggccgcgatggc
agaatttacgtggtcacagatgcggccaacgatgatccggtaaaccctagaccaggaacc
ctaagacatgcggtcacgcaagaagaaccattatggatcattttcaagagagatatggtc
attaggctcaagaaagaacttatcatcacatctttcaagaccattgatggtagaggctca
agtgttcacataaccgatggaccttgcattaagatccactatgaaactaacatcatcata
catggtattaacatccatgactgcaaaccaggatcaggtggcatgattagagatggccca
cgtcacaccgggtggtgggtcccatcagatggagatgcagtggcgatatttggaggcaaa
cacatttggatcgaccattgctctttgtctaactgcgatgatggtctcatagacgccata
catggttcgaccgctataacaatatcgaacaactacatgacgcaccatgacaaggtcatg
cttttaggacacagcgatagctatacccaggacaagaacatgcaagtcaccattgcgttt
aaccatttcggagaaggactcgttcaaaggatgccacggtgcaggcatggatatttccat
gtagtgaacaatgattatacacactgggaaatgtatgctatcggtggaagtgcttctccg
acgatatacagtcaaggcaatagatttctcgctcctaatacccgatttaataaagaggtt
acaaaacatgaagatgcacccgaaagcgaatggagaggttggaactggagatcggaaggg
gatatgttgttgaacggagcatatttccggcagtcaggagccggagcttcatcgacatat
gcaagagcttctagcctaagtgctaggccatcatcgcttgtgggttccatcacaacgaca
gcaggaacactaagttgtcggcgaggccgtcgctcttga
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