KEGG   Brassica napus (rape): 111207979
Entry
111207979         CDS       T04128                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein CIA1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    111207979
   03400 DNA repair and recombination proteins [BR:bna03400]
    111207979
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111207979
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111207979
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 eIF2A PROPPIN B-prop_COPA_B_2nd Beta-prop_DCAF12 Ge1_WD40 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 DUF4082
Other DBs
NCBI-GeneID: 111207979
NCBI-ProteinID: XP_048622070
LinkDB
Position
C8:complement(4982221..4984731)
AA seq 311 aa
MDLMEKKLELVELHKLEGHTDRVWNVSWNPVGXSTILASCSGDNTVRIWEQSSLSHSWSC
KTVLEETHTRTVRSCAWSPSGKLLATASFDGTTAIWQNLGDEFECISTLEEHENEVKSVS
WNAAGSYLATCSRDKSVWIWEVLGGGNEYDCAAVLNGHTQDVKMVQWHPTMDVLFSCSYD
NTIKVWWSEDDDGDYQCVQTLDESNNGHSSTVWAISFNAAGDKMVTCSDDLTLKIWETDI
AMMHSGEGYASWTHLCTYSAHWSRDNIIASGAGDDAIRLFVDSNNDSEENRLLASASDDG
MVKIWQLATKP
NT seq 936 nt   +upstreamnt  +downstreamnt
atggatttgatggagaagaagttggagttagtggagcttcacaaacttgaaggccacacc
gatagggtttggaacgtttcctggaaccccgtcggtnactctaccattcttgcttcttgc
agtggcgataacactgtacgcatctgggaacagagctctctctctcactcctggtcttgc
aagacagttttggaagaaacccacactagaactgtgaggtcgtgtgcttggtctccctct
ggaaagttattggccactgcaagttttgatggtaccactgccatttggcagaatcttggg
gatgagtttgagtgtatttccacattggaggagcatgaaaacgaagtcaagagtgtatca
tggaatgcagctggttcataccttgcaacatgtagtagagacaagtccgtgtggatttgg
gaagtgctaggaggagggaatgaatatgactgtgctgccgtgttaaatggacatacacaa
gatgtgaagatggttcagtggcatcccactatggatgttttattttcttgcagttatgat
aacaccatcaaggtttggtggtctgaagatgatgatggtgattatcaatgtgtccaaacc
ttagatgaatccaacaacggtcactcatctactgtttgggccatttcgtttaatgctgca
ggggacaagatggtcacttgtagtgacgatctaaccttgaagatatgggagacagatatt
gccatgatgcactctggtgaaggatatgcatcttggactcatctttgtacatattcagct
cactggtcaagggacaacattattgcgagtggagcaggcgatgatgctatacgattgttt
gtggacagcaacaatgactctgaggagaaccggttacttgcctcagccagtgatgatggg
atggtcaagatttggcagcttgcaactaaaccgtga

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