Brassica napus (rape): 111208307
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Entry
111208307 CDS
T04128
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111208307
09123 Folding, sorting and degradation
03018 RNA degradation
111208307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111208307
03041 Spliceosome [BR:
bna03041
]
111208307
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111208307
mRNA degradation factors
5'-3' decay
Lsm complex
111208307
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111208307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
111208307
NCBI-ProteinID:
XP_022563068
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Position
C7:37630886..37632287
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDGALESVRDHDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFNQPEAV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagaaaggaaacggtgttggatttggccaagttcgttgacaagggtgttcaa
gttaagctcaccggtggtagacaagtcactggaactctcaagggctacgatcagttgctc
aaccttgttcttgatggggctctagagtctgtgcgagatcatgatgatcctttgaagacc
actgaccagacaagacgcctcggtttaattgtttgccgcggaactgcagtgatgctcgtc
tcaccaactgatggaactgaagaaatcgctaaccctttcaatcaaccagaagctgtctaa
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