Brassica napus (rape): 111208310
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Entry
111208310 CDS
T04128
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Module
bna_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111208310
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111208310
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
111208310
NCBI-ProteinID:
XP_022563077
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Position
C7:53672206..53675179
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AA seq
393 aa
AA seq
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MEIILRFSVSVIFLCFGLVNSQNYSVLDFDATGDGQTDDSNAFVKTWNAACGGGGDISIL
LIPAGRTFLIQPIVFNGPCRSSNTKVQLEGVIIAPSNKEAWSNPNSRMWIKFSAVLGLVI
VGSGTINGRGSSFWEQNLKASQRPTSLHISKCDNLSISGITSVDSPKNHISIAACTNVAI
SNVRLFAPEDSPNTDGIDISRSTNVNIFDSTIQTGDDCIAINTGNTNINITRINCGPGHG
ISVGSLGVNGGSAAVSDVQVTQCTFNQTMNGARIKTWPGGQGYARNISFENITLINAKNP
IIIDQQYIDKGRVYSAEKSAVAISNIKFIDFLGTTSKKNAIKIDCSATTRCKDVLMNGIN
ITMADGKQPRVDCKNVDGKSEDTILTHDCFENI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaaattattctacgtttttcggtctcggtaatttttctctgttttggtcttgtaaac
agtcaaaactacagcgtactcgattttgatgccaccggagatggtcaaactgatgattca
aacgcttttgtgaaaacgtggaacgcggcatgtggcggaggaggagacataagcatactt
cttattcctgctgggagaacatttttaattcaacctattgtgttcaacggtccatgtagg
tctagcaatacaaaagttcagttggaaggcgtcattatcgcgcctagcaacaaagaagca
tggtccaaccccaattctcgaatgtggatcaaattttcagcggtgcttggtctagtgatt
gttggttcaggaacgattaatggtcgtggttcatccttttgggaacaaaatttgaaagct
tctcaacgacctacatcattgcatattagtaaatgtgacaacttaagtataagcggaata
acctcggttgatagtccaaaaaaccatatatcaatcgcagcatgcacaaatgttgcaata
tcgaatgtacgtctatttgcacctgaggatagtcccaacacagatgggattgatataagt
cgctcgactaacgtcaacatatttgactctacgattcaaactggagatgattgtatagca
atcaacacggggaatacaaatatcaacattacaaggattaattgtggacctggtcatgga
ataagtgtgggaagtttaggagtcaatggaggcagcgctgcagttagtgatgttcaagtg
actcaatgcactttcaatcagacaatgaatggagctagaatcaagacatggccgggtgga
caaggatatgcaagaaacataagctttgaaaacatcacactcattaacgcaaaaaatcca
attataattgatcaacaatatatagataaagggcgtgtctactctgcggagaaatcagct
gtggcgattagcaatataaaatttattgattttcttggaacgacgtcgaaaaagaatgct
ataaagattgattgtagtgcaaccacacgttgtaaagatgtcctcatgaatggaatcaat
attaccatggcggatggaaaacagcctagagttgattgcaaaaatgtcgatggaaaatct
gaagacactattttgacgcatgactgttttgaaaatatttaa
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