Brassica napus (rape): 111208610
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Entry
111208610 CDS
T04128
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
bna04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111208610
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111208610
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
111208610
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111208610
03036 Chromosome and associated proteins [BR:
bna03036
]
111208610
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111208610
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111208610
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111208610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Phage_Inh_C
DUF4187
Motif
Other DBs
NCBI-GeneID:
111208610
NCBI-ProteinID:
XP_022563543
LinkDB
All DBs
Position
C8:911616..915548
Genome browser
AA seq
527 aa
AA seq
DB search
MKMDIVGVEDVHILDPNLLQLPCLSPSPLNSSSYIADELFSHWLSLPETATLVKCLIDEA
KSGTPTNLSKSYATVFLSNGTPPLSPRSSPGSPRFSRHRASPPSLRSPLRSVKEPKHELI
PQFYFLHGRPPAKELKEQCISMVDHFFSNFIDGLHVDEFKSVTKEVCKLPSFLSPALFRK
MDSDCSGVVTRDAFIKYWIDGNMLTMDTASQIYNILKQQDCKHLRQADFKPLLDELLATH
PGLQFLRTTSEFQERYAETVIYRIFYYINRSGTGCLTLRELKRGNLIAAMQQLDEEDDIN
KIIRYFSYEHFYVIYCRFWELDGDHDCYIDKDNLIKYGNHALTYRIVDRIFSQAPRKFTS
KVEGKMSYEDFVYFILAEEDKSSEPSLEYWFKCIDLDGNGVITPNEIQFFFEEQLHRMES
ITQEPVHFNDILCQIIDMIKPEEENCITLQDLKGSKLSGNVFNILFNLNKFMAFETRDPF
LIRQEREDPSLTEWDRFAQREYVRLSMEEDVEEVANGSADEPLEPPF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggatattgttggagtagaagatgttcatatattagatccgaacctcttgcag
ctcccatgcttatctccttctccgctcaattcaagctcttatattgctgatgaactgttc
tcccactggctctcactcccagaaactgccacattggttaagtgtttgattgatgaagct
aaatctggaactccaactaacttatccaagagttacgcaacagtctttctgagcaatggc
actcccccactctcgccacgcagctcgcctggctccccacgtttctcgaggcacagagct
agccctccatctctccgctctcctctgagatctgttaaggaacctaagcacgaactcatt
cctcagttttacttcctgcatgggcgtccaccagctaaagaactaaaggagcaatgtata
tccatggttgatcatttttttagtaactttattgacggactacatgtggatgaattcaaa
tctgttacgaaagaagtctgcaagctgccttctttcctttctcctgcacttttcagaaag
atggattccgattgcagcggtgtagttacaagggatgcgtttatcaagtattggattgat
ggaaatatgttaacaatggacacagcctctcagatatataatatactaaagcagcaggac
tgcaagcacctgagacaggcagacttcaaaccacttctggatgagcttctggcaacacat
cctggcttacaatttctgaggactacatccgaatttcaagaaagatatgctgaaacggtc
atctacagaatattttactacattaacagatccggaactggctgccttactctgagagag
ctgaaacgcggaaatcttattgctgctatgcaacagcttgatgaagaagacgacatcaat
aaaattattaggtacttctcctatgagcacttttacgtgatctactgcagattctgggaa
cttgatggtgaccatgactgctatatcgataaggacaatctcatcaaatatggtaaccat
gcccttacctacaggattgttgatagaatattttcacaggctcctaggaaatttacgagc
aaagttgaagggaagatgagttatgaagattttgtatacttcattctcgccgaggaagac
aagtcatctgagcctagtcttgagtattggttcaagtgcatagacttggatggaaatggg
gtgatcactccaaacgaaatacaattttttttcgaagagcagttgcatcgcatggaaagc
ataacccaggaacctgttcacttcaacgatatcctatgtcagataattgacatgattaaa
ccagaggaggagaactgcatcaccctccaggatctgaaaggatccaaactttcaggaaac
gtcttcaatatactcttcaaccttaacaaattcatggcttttgaaacacgtgaccccttc
ctcattcgccaggaacgggaggatccaagtttaacagagtgggatcgtttcgctcagaga
gagtatgtgagattgtcaatggaagaagatgtggaggaagtcgcaaatgggagtgcggat
gaaccactcgaacctccattttag
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