Brassica napus (rape): 111208720
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Entry
111208720 CDS
T04128
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111208720
03041 Spliceosome [BR:
bna03041
]
111208720
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111208720
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111208720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111208720
NCBI-ProteinID:
XP_022563785
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Position
C8:44960074..44963296
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AA seq
418 aa
AA seq
DB search
MQRLKQQQQQQAMMQQALMQQQSLYHPGLLTAPQIEPIPSGNLPPGFDPTSCRSVYVGNV
HIQVTEPLLQEVFASTGPVESCKLIRKEQSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI
KVNWAYASGQREDTSAHFNIFVGDLSPEVTDAMLFSCFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQTAIDEAGGKWLGTRQIRCNWATKGATSGEDKMSSDSKSVVELTSGVS
EDGKDASNGDAPENNAQYTTVYVGNLGPEVSQVDLHRHFYSLGAGVIEEVRIQRDKGFGF
VRYSTHVEAALAIQLGNTHSYLGGRQMKCSWGSKPTPPGTASNPLPPPGPAPIPGFSASD
LLAYERQLAMSKMAGMNPMMHHPQGQHALKQAAMGATGSNQAIYDGGFQNAQQLMYYQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagagattgaagcagcagcagcaacaacaagcgatgatgcagcaagctttgatgcag
caacagtctctctaccatcccggactcctcaccgctcctcagatagaaccaatcccaagt
ggaaatcttccccctggttttgatccaacttcttgccgcagtgtgtacgttggaaatgtc
catattcaggtgacggaacctctgctccaagaggtttttgccagcactggtcctgtggaa
agctgtaagcttattaggaaagaacagtcttcctatggttttgtccactactttgatcga
cgatcagctggtctggctatcctctctctcaatggaaggcatttgtttgggcaacctatc
aaagtgaactgggcttatgctagtggccagagggaggatacatcagctcactttaatata
tttgttggggatttgagcccggaggttactgatgcaatgctgttcagttgcttctctgtc
tacccaagttgctcggatgcaagggttatgtgggatcagaaaactgggcgttcaagagga
tttggttttgtttctttccgaaaccagcaggatgcccagactgcaatagatgaagcaggc
gggaaatggcttggtaccaggcagattcgctgcaactgggctacaaagggagccacttct
ggtgaagacaagatgagctcggattccaaaagtgttgtggaactaaccagtggtgtctcc
gaggatggcaaagatgcaagtaacggtgatgctccagagaacaatgctcagtacacaact
gtctacgttgggaatcttggtccagaggtttctcaggttgatcttcaccgccacttctat
tctcttggcgctggagttattgaggaggttcgtattcaaagagacaaaggttttggattt
gtaagatactctactcatgtagaggccgccctcgctatccagctgggaaacacacattcc
tacctcggtggcaggcagatgaagtgttcttggggaagcaagccaactccaccaggaaca
gcttcgaacccgcttcctccaccaggtcccgcaccaatccctggattctcagccagcgac
ctcttggcttacgagaggcaactagccatgagcaagatggcgggaatgaatccgatgatg
catcacccgcagggacaacacgctctcaagcaagctgcgatgggagccactggttcaaac
caggccatctatgacggtggtttccagaacgcgcagcagctcatgtattaccagtga
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