Brassica napus (rape): 111209158
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Entry
111209158 CDS
T04128
Name
(RefSeq) vacuolar protein sorting-associated protein 35C
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
bna
Brassica napus (rape)
Pathway
bna04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111209158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
111209158
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111209158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
111209158
NCBI-ProteinID:
XP_022564712
LinkDB
All DBs
Position
C8:complement(35126858..35131866)
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AA seq
790 aa
AA seq
DB search
MIADDDEKWLAAATAAVKQNAFYMQRAIDSNNLKDALKFSAQMLGELRTSKLSPHKYYEL
YIRASDELRSLEMFFRDETALGCSIAELYELVQHAGNILPRLYLLCTIGSVYIKSKDVTA
KDILKDLVEMCRAVQHPLRGLFLRSYLAQVTRDKLPSIGSEVEGDTETHMDALEFVLQNF
TEMNKLWVRMQHQGPTREKEKREKERNELRDLVGKNLHILGQLEGVDLVVYRDTVLPRIL
EQVVNCKDELAQCYLMDCIIQVFPDDFHLQTLDVLLGACPQLQPSVDIKTVLSGLMERLS
NYAASSVEALPNFLQVDAFSKLNHAIGKVVEAQVDLPASASVTLYLFLLKFTLHVHSDRL
DYVDQVLGSCVSQLSATGKLCDDKASKQIVAFLSAPLEKFNDVVTILKLTNYPRVMEYLD
NDTNKAMAIIIIQSILKNDTRIATADEVDAMFELIKGLIKDFDGLADNDEIDEEDFQEEQ
NSVARLVHFLYNDDPEEMSKIIFRIRKHILTGGPKRLPLTIPPLVFSALKLVRRMRGGDE
NPFGDDTSTPQKILQLLTETVEVLSDVSASELALRLYLQCAQAANDCELETVAYEFFTKA
YLLYEEEISDSKAQVTALRLIIGTLQRMRVFNVENRDILTHKATGYSAKLLKKPDQCRAV
YECAHLYWAEEGENLKDGERVVLCLKRAQKIADAVQKMANASRGASSTGSVSLYVELLNK
YLYFLEKGNPQVTGETIQSLAELIRSETKKAESGAGTFITSTLRYMEFQRQQEDGGMSEK
YQKIKMEWFE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgacgacgatgagaagtggctcgctgccgccaccgccgccgttaaacaaaat
gctttctacatgcagcgcgcgatcgactccaacaatctcaaagacgcgcttaagttctct
gctcagatgctcggcgagcttcgtacttccaagctttctcctcataaatactatgaactc
tatattcgagcttctgatgagctgaggagtctggagatgttctttagggatgagacggct
cttggttgctccattgctgagctttacgagcttgttcagcacgccggtaacattttgcca
agattgtatcttctctgtaccataggatctgtatatatcaaatccaaggacgttactgcc
aaggatatactaaaggatcttgttgaaatgtgccgagctgttcaacatcccttgcgtggt
ctcttcttgagaagttaccttgctcaagtcactagggataagttacctagcattggttca
gaggtggaaggagataccgaaacacacatggatgctttagagttcgtgcttcaaaatttt
actgagatgaacaaactatgggttcgaatgcaacatcagggacctacccgggagaaggag
aaacgggagaaagaaaggaatgaactacgtgatcttgttggaaaaaaccttcatatactt
ggtcagttggaaggtgttgaccttgtagtttacagagatactgttcttcctagaatactg
gagcaggttgtcaactgcaaggatgaacttgcacagtgctacctaatggattgcattatt
caagtttttcctgatgactttcaccttcaaactctcgatgtattattaggtgcttgtcca
caacttcagccatctgttgatatcaagacagttctttcgggtctaatggaaagactttcg
aactatgctgcatctagtgtggaagcattgcctaatttcctgcaagtagatgccttttca
aagttgaatcatgccattgggaaggttgtagaagcacaggtggacttgccagcctcagca
tctgtaacattgtatttgtttcttctgaaattcactctccatgtccattccgatcgtcta
gactatgtggaccaagttttgggatcttgtgttagccaactctccgccacaggaaaactt
tgtgatgacaaggcatcaaaacagatcgttgcatttcttagcgctccattggagaagttt
aatgatgttgtaactattttgaagcttaccaactatcctcgagtaatggaataccttgac
aacgatacaaacaaagcaatggcaattattataattcagagcattttgaaaaacgatact
cgcattgctactgctgatgaggttgacgcaatgtttgaactgataaagggacttatcaag
gactttgacgggctagctgataatgatgagattgatgaagaagatttccaggaagagcag
aactctgttgcacggttggttcactttctctacaatgatgacccagaggaaatgtctaag
ataattttcagaataaggaagcacatcctgactggaggacctaagcgtctacctcttacg
ataccaccacttgtcttttccgctctcaagttagttcggcgaatgcgaggtggagatgaa
aacccatttggagatgacacgtcaacaccacaaaaaattctacagctcttaacagagacc
gtggaagttctatcagatgtctcggcatctgaattggcattgcgactctacttgcaatgt
gctcaggcagcaaatgactgtgaattagaaacagtcgcatatgagttcttcacgaaggca
taccttctgtatgaagaagaaatttcggattcaaaggcacaagtaacagcattacgttta
ataatagggacactacagcggatgcgtgtatttaatgttgagaacagagatattttgact
cacaaggcgacagggtactctgcgaaactcctcaagaagccagatcagtgtagagctgtt
tacgaatgtgcgcacctttactgggctgaggaaggcgagaacctgaaagatggagagagg
gttgtgctttgcctgaagagggcacaaaaaattgcagatgctgttcagaaaatggccaac
gcatcccgtggtgccagtagcaccgggtctgtgtctctgtatgtcgaactgctgaacaag
tatctctactttttggagaaaggaaatccacaggtaacaggcgaaacaatccagagctta
gctgaattaatcagaagtgagacgaagaaagctgagtcgggcgcggggactttcataacc
agcactctgcgttacatggagtttcagagacagcaggaggatggtggcatgagtgagaaa
taccagaaaatcaaaatggaatggtttgaatga
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