Brassica napus (rape): 111209460
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Entry
111209460 CDS
T04128
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
bna03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111209460
09124 Replication and repair
03420 Nucleotide excision repair
111209460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
111209460
03400 DNA repair and recombination proteins [BR:
bna03400
]
111209460
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111209460
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111209460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
CxxCxxCC
Motif
Other DBs
NCBI-GeneID:
111209460
NCBI-ProteinID:
XP_022565095
LinkDB
All DBs
Position
C9:29153255..29153781
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AA seq
89 aa
AA seq
DB search
MVNPIKGISISCDVPIAQFITHLDNLLRSSQKFITEILKLDTSCMFVKPQSEEMIRCEIF
KFRDQISFAKPTSSPFLACLLDVYIVRLK
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atggttaaccccatcaaaggaatctccatttcttgtgatgttcccatagcacagttcatt
acacatttggacaatttgttgcgttcttcgcagaaattcataactgaaatactaaaacta
gacacttcttgtatgtttgtgaagccacaatccgaggagatgatccgctgtgaaatcttc
aagttcagggaccaaatctctttcgcaaagccgacatcatctccatttttggcttgcttg
cttgatgtctatatagttcgtttaaaatag
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