Brassica napus (rape): 111209870
Help
Entry
111209870 CDS
T04128
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
bna
Brassica napus (rape)
Pathway
bna04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
111209870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
111209870
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111209870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
CDC45
Vfa1
PBP1_TM
Pox_Ag35
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
111209870
NCBI-ProteinID:
XP_022565610
LinkDB
All DBs
Position
C9:complement(41816005..41821696)
Genome browser
AA seq
353 aa
AA seq
DB search
MQETILDFLEECEFVDTSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKELVKNQN
YEASSAKKKRKRLETGKEEEDDDDGEGEEEEEEDNKQDGQQKMSHVNVERNRRKQMNEHL
TVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKERKTYAEVLSPRLVPSPR
PSPPVLSPRKPPISPRISHQHLLLHPISPRTPLPTSPYGGHPPQLPLIPQPPRSYSLGDP
PPYSPASSSSSPSVSSNHESSLINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVM
KIIAALEDLSLEILQVNINTVEETMLYSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagacaatactggattttcttgaagaatgtgaattcgtggacacttcactagcc
ggagatgatctgtttgctatcttagagagtcttgaaggcgccggagagatatctcccacg
gctgcatctacacctaaagatggaaccacaagttccaaagagttagtaaagaatcaaaac
tatgaagcttcatctgctaaaaagaagaggaaaagactagaaactgggaaagaagaagaa
gacgacgacgatggagaaggagaggaagaagaagaagaagataataagcaagatgggcaa
caaaagatgtctcatgtaaacgtggaacgtaataggagaaagcaaatgaacgagcatttg
accgttttacgttctcttatgccttgtttctacgtcaagcggggggaccaagcatcgatt
ataggtggagttgtggaatacattagcgagctacagcaagttcttcaatctttagaagcc
aagaaagaacgtaagacctacgcggaagtcctaagcccgagactagtcccaagccctcgt
ccttcaccgcctgttctaagcccgcgaaaaccgcctattagccctcgtatcagccaccaa
catctccttctccatcccataagccctcgaacccctctgcccacaagcccatacgggggc
catcctccgcaactaccactcatcccacaacctcctcgttcttacagcttaggggaccca
cctccatactccccagcttcatcttcttcttctccttcagtcagtagtaaccatgagagt
agtttgataaatgagcttgttgcaaactcaaagtcagctttggctgacgtggaagtgaag
ttctcaggagctaatgtgctgctcaaaacggtgtcgcataagatcccaggacaggttatg
aagataatcgctgctcttgaggatttgtctctcgagattcttcaggttaacattaacacc
gtcgaagaaaccatgctttactctttcaccatcaagattggaattgagtgccaactaagt
gcagaagaattggctcaacaaattcagcaaacattctgctaa
DBGET
integrated database retrieval system
