KEGG   Brassica napus (rape): 111209877
Entry
111209877         CDS       T04128                                 
Name
(RefSeq) histone deacetylase 7-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bna  Brassica napus (rape)
Pathway
bna03082  ATP-dependent chromatin remodeling
bna03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111209877
   03083 Polycomb repressive complex
    111209877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    111209877
Enzymes [BR:bna01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111209877
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111209877
   HDAC complexes
    Sin3A-HDAC complex
     111209877
    BRAF-HDAC complex
     111209877
    REST complex
     111209877
    SHIP complex
     111209877
    MiDAC complex
     111209877
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111209877
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111209877
  Chromatin remodeling factors
   NuRD complex
    111209877
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 111209877
NCBI-ProteinID: XP_022565628
LinkDB
Position
C8:complement(32329569..32332530)
AA seq 409 aa
MENAASLASGTDGKKRRVTYYYEPYIGDGSQRVSQQITTTHNLIRSYNLHNDMDIIRPSL
AKDSDFVRFHSPEYITCLATLTPEYVDMANKSENVAETSLELFDLDEWDTPFFPGLIDYC
RLYAGGSICAAAKLNRREADITINWSGGMHRAKRDEARGFGYVNDVVLGILELLKVFKRV
LYIDIGYYHGDAVQEAFYKTDRVMTVSFHESVVQSRGDITDNGVEKGEYYSLNAPLKNGL
NDASFVNLLVPVIHKAMEVYQPEAIVLQCGPDSLAGDALGKFNLTIKGHAACLQYIRSFN
VPLMLLGGQGHTLGNVARCWCYETAVAVGKEIDDDLETNVFDACFAPSYQLHIEPNRMKN
LNTDGYIAKIKKTLLNQLSQVIHAPSVQFQDTPPISQVTEAAEEDMETR
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggagaatgcggcgagcttggcttcaggtaccgacggaaagaaacggcgcgtgacctac
tactacgagccatacatcggcgacggcagtcaacgggtatcccaacagatcactactact
cacaacctcatccgcagctataacctccacaacgacatggatatcatccgccctagcctt
gccaaagattcagatttcgttcggtttcactcgccggagtacataacatgcctcgctact
ctcacgccggagtatgtcgacatggctaataagtcagaaaacgtagccgaaacttccttg
gagctcttcgacttagacgagtgggacacccctttcttccctggcctcatcgattattgc
cgtctctacgctggtggttctatttgcgccgccgccaagctgaaccgacgcgaagctgat
atcaccatcaattggtccggcgggatgcaccgtgccaagagagatgaggctcgtggcttt
ggctacgtcaatgacgttgttcttgggatcctcgagttgctcaaagtcttcaagcgagtt
ctctacatagatattgggtattaccatggggatgcagtacaagaagcgttctacaaaact
gatagagttatgactgtttctttccacgagtctgtggtccaaagcagaggagacataaca
gacaacggggtagaaaagggagaatactattctctaaatgctccactaaagaatggtttg
aacgatgcaagtttcgtcaatttattggtacctgttatccacaaggctatggaggtttat
cagccggaagcaattgttcttcagtgtgggcctgattcactagctggtgacgcgttgggt
aaattcaacttgactatcaagggtcacgctgcatgtctccagtacataagatcatttaac
gttcctctcatgctcttgggtggtcaaggtcacactcttggaaatgttgcacgttgctgg
tgctatgagacagctgttgcggttggaaaagaaattgacgacgatctcgaaaccaatgtg
ttcgatgcgtgttttgccccaagttatcaacttcatattgagccgaaccgcatgaagaat
ttaaacacagacggatatattgcaaaaataaagaagacattactaaaccaactttcgcaa
gtgatacacgcacctagtgtgcagtttcaagacactccaccaatcagtcaagttacagaa
gcagcggaagaggacatggagacgagataa

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