Brassica napus (rape): 111210005
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Entry
111210005 CDS
T04128
Name
(RefSeq) paired amphipathic helix protein Sin3-like 5 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
111210005
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
111210005
REST complex
111210005
Heterochromatin formation proteins
Other heterochromatin formation proteins
111210005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
RB_B
INSC_LBD
Motif
Other DBs
NCBI-GeneID:
111210005
NCBI-ProteinID:
XP_022565904
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All DBs
Position
C9:complement(16613025..16618893)
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AA seq
1073 aa
AA seq
DB search
MAQRSVLIFVPFFCVRNQKEMKRVREEVYVETNGKPLTIGGGGNTGGLTTGDALSYLKAV
KDIFQDKKDKYDTFLEVMKDFKAQRVDTSGVIARVRVLFKGYDDLLLGFNTFLPKGYKIT
LPEKKTVDFGEAIEFVNKIKARFGSDDRAYKKFLDILNMYRKESKSISDVYQEVTLLFQD
HEDLLAEFAHFLPDNSGSGSAHYPLSGRNAVPGAPVPAMHPRNFEKRIKIRNEYTEHSDQ
REDGDENLVACSAGQWPGYLKVGDKEGIQDYENGSKDNGSHKILPSTSNHVAKGINELDL
SECAQCSPSYRLLPDDYLIQIPSYRNTLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYEES
LFRCEDDRFELDMLLESVNAAINRVEALLEKINNNTISLETPICIKEHLSELNLRCIERL
YGDYGLDVMDFLKKNSHVALPVILTRLKQKQEEWARCRSDFRKVWAEVYAKNHHKSLDHR
SFYFKQQDSKNLSTKGLVAEIKDISDRKHKEDPLHAIAVGTKPSFTPDVEFSYTDTQVHA
DLYQLIKYYCEEICATEQSDKVMKLWVTFLEPMFGVPSRSQTDETVIDVAKSKDNQEQRE
AVKDHTRDSSPVSNLKPLTPPKTPNKESPTIGSSFAQDKLHAGAAMNTEHKVEREEGELS
PTESFEHDNSEVYRDNGVESVQKLPDNVRSNTSPEDDGSKTTLKLIEANENASKDIASGS
KFGGQVSLDEEHKRPMNCDQLGESFSRFSERSLQPVKPLAKHVPVALHDSPNASRVFYGN
DSFYVLFRLHQMLYERILSAKIHSERKWKAPDPDNTSPDSYTRFMDALYNLLDGSSDNTK
FEDECRAIIGAQSYILFTLDKLVQKFVKHLHAVAADETDTRLLQLQTYEKYRKPGRFFEI
VYHENARALLHDQNIYRIEYSSAQTRLAIQLMNSGNDQPEVTAVAVEPGFANYLQNEFLS
LVPDEEKPGLFLKRNKAKMSGPDESSGMSRAMEGLKIINEVECKMCCSSSKVKYEPNTSD
LLYRSKQKKPKLNPNGLDNDKTTPSSTEISRKTRISRFHTSLNRRLVALRPLP
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcgaagcgtgttaatctttgttccttttttttgtgttagaaatcaaaaagag
atgaagagggttagagaagaggtctacgttgaaacaaatggtaagcccctaacgattggt
ggaggaggaaacacgggagggctgacaacaggtgatgccttgagctacctcaaagctgtc
aaagatatatttcaggacaagaaagacaagtatgacactttccttgaagtcatgaaggac
tttaaagctcagagagttgacacaagtggtgtcatagcgagagtaagagtgttgttcaag
ggctatgatgacttgcttttggggtttaataccttcttgcccaaagggtacaagataacc
cttccggagaagaagacagttgattttggagaagctattgagtttgttaacaagatcaag
gcgcggtttgggagtgatgaccgtgcatataaaaagtttctagacatcttgaacatgtat
agaaaggaaagcaagtccatctctgatgtttatcaagaggttactctgttgttccaggac
catgaagatctgcttgcggagtttgcccatttcttacctgataattcaggatcaggttct
gctcattaccctctgtccggaaggaacgcagtaccaggtgctccagttcctgccatgcat
ccaaggaattttgagaagagaataaaaatacggaatgagtatactgaacactcagatcaa
cgagaagatggtgacgagaaccttgtggcttgctctgctggtcaatggccaggatacctg
aaggtaggggacaaagagggtattcaagattatgaaaatggcagtaaagacaatggaagt
cacaaaattctaccatctaccagcaaccatgtggccaagggtattaatgaactggatctt
tctgagtgtgcacaatgttctccaagttatcgtctccttccagatgattatcttattcag
atcccaagctacagaaatacactaggtgaaaaggtacttaacgatcactgggtatctgtc
acatcggggagtgaggactactcattcaaacacatgcgtaaaaaccagtacgaagaaagc
ttgtttcgatgcgaggatgacaggtttgagttggacatgttattagagtctgtgaatgca
gccattaaccgtgtggaagctcttcttgagaagatcaataacaacacaatctctctagag
acaccaatatgtatcaaagaacacttatcagaactgaacctaagatgcattgagcgattg
tacggagattatgggcttgacgtcatggattttctgaagaagaattctcatgttgcctta
ccggtgatactaactcgcctgaagcagaagcaagaagaatgggctaggtgtcgctctgat
ttcaggaaagtatgggctgaagtatatgctaagaatcatcacaaatcactagatcaccga
agcttctatttcaagcagcaggactccaagaacctaagcacaaaaggtttagtggcggaa
ataaaagatatcagtgacagaaagcataaagaagatcctcttcatgccattgctgtggga
actaagccctctttcacccctgatgtggagttcagttacactgatacacaagttcatgct
gacctttatcaactaatcaagtattattgtgaagagatatgtgctacggaacagtcggat
aaagtaatgaagctgtgggtaacctttttggagcccatgtttggcgttccttctaggtct
caaactgatgagacagtgatagatgttgcaaagtccaaagacaaccaagagcagcgtgag
gcagtgaaagaccacacccgtgacagttctcctgtctcaaaccttaaaccgctaacacct
ccaaaaacacccaataaagaaagtccaacaataggaagctcttttgcgcaagataaactg
catgctggtgcagctatgaataccgagcataaggttgagcgagaagagggtgagttatct
cccaccgaaagttttgagcatgacaactctgaggtttatagagacaatggcgtcgagtct
gtgcagaaactgccagacaatgtaagaagtaatacttcccctgaagatgatggaagtaaa
actactctaaagttaatagaagcgaatgaaaacgcctctaaagatattgcttcaggaagc
aagttcggtggccaagtttctttagatgaagagcataaaagacctatgaattgtgaccag
cttggtgaatccttttccagattttcagaacggtctctgcaacctgtaaagccccttgca
aagcatgttcctgtggcactacatgactcccccaatgcttctcgagttttctatgggaat
gattcattttatgttcttttcaggcttcatcaaatgttgtacgagagaatactatctgca
aagatacattcagagaggaaatggaaagctccagatccagataacacatctcctgattct
tataccaggttcatggatgccctctataatttacttgatggctcgagtgataacacaaag
tttgaagatgaatgccgggctattattggagcacaatcatatattctcttcacattggac
aagctagttcagaagtttgtcaagcatcttcatgcagttgcagctgacgagacagacacc
aggctactgcagctacaaacatacgagaagtacagaaaaccaggaagattctttgagata
gtgtaccatgagaacgccagagcccttctacatgatcagaacatatacaggattgaatat
tcatctgcacagacccgtctggcgattcaacttatgaacagcgggaatgaccagccggaa
gttacagctgtagcagtggaaccaggttttgctaattatcttcagaatgagtttctttcg
cttgtacctgatgaagaaaagcctggtctgtttcttaagaggaacaaggcgaaaatgagc
ggtccagatgaatcttcagggatgtcgcgtgccatggaaggattgaagattatcaacgag
gttgaatgtaagatgtgttgcagttcttccaaggtcaagtatgaaccaaatacatcagat
cttttgtatagaagcaagcagaagaaaccaaaactgaatccaaatgggcttgacaatgat
aaaactactcctagtagcactgaaatctcgagaaagacgagaatatcacgttttcacaca
agtcttaaccgtagacttgttgccttacggcccttaccttaa
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integrated database retrieval system
