Brassica napus (rape): 111210721
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Entry
111210721 CDS
T04128
Name
(RefSeq) alpha-L-arabinofuranosidase 2-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111210721
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
111210721
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GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
zf-CHCC
DUF3805
Motif
Other DBs
NCBI-GeneID:
111210721
NCBI-ProteinID:
XP_048623244
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Position
C9:complement(63214280..63217919)
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AA seq
657 aa
AA seq
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MMDMECSLKFLTSICMILFLLGSYSAYENVRLVDAREDNEKHYVTLQVDASNATGRPIPE
TLFGIFFEEINHAGAGGLWAELVSNRGFEAGGQIIPSSIWPWSIIGDESTISVVTDRSSC
FERNKIALRMEVLCNSSGCPSEGVGVYNPGYWGMNIEEGKKYKVTLYVRSTGDIDVSVSL
TSSNGSLTLASEQIIALTSEVSKWTKKEVLLEANGTDDGARLQLTTTKNGSIWLDQVSAM
PVDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCYVEGDSLSNAFQWKETVGAWEERAGHYG
DVWKYWTDDGLGHFEFFQLAEDLGAAPIWVFNSGISHQDQVETASIMPFVQEALDGIEFA
RGDANSTWGSVRAAMGHPKPFDLKYVAVGNEDCWQKYTYYKGNYLVFYNAIKKAYPDIKI
ISNCDGSSQPLDHPADYYDFHVYKPAKELFSMSHKFDKTSRDGPKAFVSEYAVNITDANT
GNLLAALGEAGFLLGLEKNSDVVGMVSYAPLFLNINDRRWIPDAIVFNSSHLYGTPSYWL
QQFFTESSGATLLSSTMEGNSSYVEASAISFQSNGSDYIQIKAVNFANVTVELKVKMTGL
DSKVSAKKKKVLTSASVMDENSFSNPEMITPQESLGVMPEGNLTFVLAPYSFSSFDI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatggagtgttctctgaagtttctgacaagtatttgcatgatattatttctc
cttggctcttattctgcttacgagaatgttcgtcttgttgatgctcgagaagacaacgaa
aaacattatgtgacactgcaagtagatgcttccaacgccacaggacgacccattcctgaa
accctttttgggatcttctttgaggaaatcaatcatgctggagcaggtggactgtgggct
gaacttgttagcaacagaggatttgaagccggtggacaaatcattccttccagtatctgg
ccttggtccattattggagatgaatcaaccatatctgtagttacagaccgctcttcatgt
tttgagcgcaacaaaattgcacttagaatggaagtgctttgtaacagcagtggttgtcca
tcagaaggagtcggagtttataacccgggttactggggcatgaacattgaagaaggaaag
aaatacaaagtgaccctttatgtgcgttccactggggacatcgatgtgtctgtgtctttg
acaagctcgaatggatcactaactcttgcatcagagcagattatagctttgacttctgag
gtttcaaaatggacaaagaaggaagtgcttttggaggcaaatggaacagatgatggcgca
aggcttcaattgacaaccaccaaaaatggttcaatctggcttgatcaagtctcagccatg
cctgtggatacttataagggacatggttttaggaatgatcttttccaaatgatggttgat
ctcaaacctcgtttcatccgtttccctggtggttgttatgtggagggtgattcgttaagc
aacgcattccagtggaaagaaaccgtgggagcttgggaagagagagctggacactatggt
gatgtttggaagtactggaccgatgatggtcttggtcactttgagttctttcaactggct
gaagatctcggtgcagctccaatatgggtgtttaacagtggaatcagtcatcaagatcaa
gttgaaaccgcaagtatcatgccgtttgttcaagaagcgctagatggtattgagtttgct
cgtggtgatgctaattcaacatggggatcagttcgagctgcaatgggacatccaaagcct
tttgaccttaaatatgttgcggtcgggaatgaagattgttggcagaaatacacatactac
aaaggaaactaccttgtgttctataatgctatcaagaaagcctatccagacatcaaaatc
atctccaactgcgatggatcttctcaaccactcgatcaccccgctgattactatgatttt
cacgtttataaacctgccaaggagttgttttccatgtcccataagtttgacaaaacgtcg
cgtgatggtccaaaggcttttgttagtgaatacgctgtgaacataacagatgctaatact
ggaaaccttctagctgctcttggtgaagcaggtttcctccttggtttggaaaagaacagt
gatgttgtgggaatggtaagttatgcacctctcttccttaacataaacgacagaaggtgg
attccagatgcaatagtgttcaactcctctcatttgtatggaacaccaagctactggctc
caacagttcttcacagagtcaagtggagcaactcttctcagctctactatggagggaaac
tcttcttatgttgaagcatctgccatatccttccaaagcaatggctctgattacatacag
attaaggctgttaactttgcaaacgtgacagtggagctgaaggtaaagatgactggattg
gactcgaaagtttctgcaaaaaagaagaaagtacttacatctgccagtgtgatggatgag
aactccttctccaacccagagatgattacgccacaagaaagcttaggggtgatgcccgag
gggaacttgacgtttgttctcgcgccctactccttttcatcattcgacatttag
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