Brassica napus (rape): 111211018
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Entry
111211018 CDS
T04128
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111211018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
111211018
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111211018
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
PBP1_TM
Vac7
Motif
Other DBs
NCBI-GeneID:
111211018
NCBI-ProteinID:
XP_048638328
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Position
A6:complement(6432198..6444205)
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AA seq
741 aa
AA seq
DB search
MYKSQYISGQREKFVRLDDLDSSASHATGMMTKRNCFGFPVKNRGSEKKRASKSFREGVK
IGSEGLFSIGKSVTRAVFPEDLRISEKKIFDPQDKTLLIWNRMLVISCILAVSVDPLFFY
LPIVDNSGSSCIGIDTKLAVTTTTLRTILDVFYLTRMALQFRTAYIAPSSRVFGRGELVI
DPAKIAQRYLTRYFIVDFLAVLPLPQIAVWKFLHGSKGMDVLPTKTALLNIVITQYIPRF
VRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSVERNDTCWRFACK
VQPDPKLCVQILYCGTKFVSSRETEWIKTVPELLKSNCSAKADDAKFNYGIYGQAISSGI
VSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTFPGEVLFSIAIAIAGLLLFALLIGNMQT
YLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLP
KDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLF
IIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEV
EAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWASSFIQAAWRRHSRRKNAELR
RIEEEEDEMGYEDEYDDDDAEEEDERTPVFTRTESSSRLRSTIFASRFAANALKGHRLRS
TESSKRLLNLQKPPEPDFDAE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcccaatacataagcggccagcgagaaaaatttgttaggttagatgatcta
gattcaagtgcttctcatgctactggaatgatgacgaagagaaactgtttcggattcccc
gtcaagaatcgaggtagcgaaaagaagagagcctccaaatctttcagggaaggtgtcaaa
atcggatcagaaggtctgttttccatcggcaaatctgtaacgagagctgttttccctgaa
gatctaagaatatcagagaagaaaatcttcgaccctcaagacaaaacacttctcatatgg
aacagaatgttggtcatttcttgtattttagctgtctccgttgatccgctcttcttctat
ctccccattgtggacaactcggggagcagctgtatagggattgacacgaagctagccgtt
acaacaacgactcttagaacgattcttgacgtcttttatctaactagaatggctcttcag
tttcgtacagcttacatagctccttcttctcgtgtgtttggtcgtggtgagcttgtgatt
gatcctgctaagatcgctcaacggtatttaacacgttatttcattgttgatttcctcgca
gtgcttcccttaccgcagattgcggtatggaagtttcttcacggatcgaaaggaatggac
gtgttacctactaaaacggctctattgaacattgtaatcacgcagtacattccaagattc
gttaggtttataccgttaacatcggaattaaagaagactgcgggagcttttgctgaaggt
gcttgggctggtgctgcttattatctcctttggtatatgcttgcaagccacataactgga
gctttctggtacatgttgtcagtggaacgtaatgatacttgttggagatttgcgtgtaaa
gtccaaccagatccaaaactatgtgttcagattctgtattgtgggaccaaatttgtgagc
agccgtgaaacagaatggatcaagacagtccctgagcttctcaagagcaactgttctgct
aaagcagatgatgcaaagttcaactatgggatctatggccaggctatatcttcaggcatt
gtatcatcaacaacgtttttctccaagttctgttattgtctttggtggggtcttcaaaat
ctcagcacgttaggtcaagggctgcaaacaagtacatttccaggagaggttctgttctcc
attgcgattgctatagctgggcttcttcttttcgcgcttctgatcgggaacatgcagact
tatcttcagtcacttaccgttcgtcttgaggagatgaggatcaaaagacgcgactctgaa
cagtggatgcaccacaggtcacttccacagaaccttagggaaagagtcagacgatatgat
caatacaaatggttagaaacaagaggcgtcgacgaagagaacatagtccagagtttacca
aaggatctaaggagagacataaaacgccatctctgtctgaatttagttaggagggttcct
ctgtttgctaatatggatgaaagattacttgacgcgatctgcgagaggttaaagccaagt
ctctacacggagagtacttacattgtccgtgagggagacccggttaacgaaatgctcttc
ataatcagaggccggttagagagtgtaaccacagatggaggacgaagcggtttcttcaac
agagggttactgaaagaaggagacttttgtggtgaagagcttctgacttgggcacttgat
cccaaagcaggctcaaacctaccttcttccacaagaacggtaaaggctctgactgaagta
gaggctttcgctctcgaagccgaagagctcaagtttgtagcaagtcagtttaggagactt
catagccgacaggttcaacagacttttaggttttactcacagcaatggagaacttgggct
tcttccttcatccaagctgcttggcgtcgccattcgagaaggaagaacgctgagctgaga
aggatagaagaagaggaagacgagatgggttatgaagatgagtatgatgatgatgatgct
gaggaggaagacgagaggactccagtgtttacaagaaccgagtcttcttctagactacgt
tcgacgatatttgcttcgagatttgctgctaatgcattgaaaggtcacagactaaggagc
acagagagttcaaagaggttgttgaatctgcaaaagcctccggaacctgattttgatgct
gaataa
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